RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 PEA15Q15121 130 aa13.29□□□□□ -0.28
LSS-202ENST00000397728 SLC25A53Q5H9E4 307 aa13.29□□□□□ -0.28
LSS-202ENST00000397728 COMMD7Q86VX2 200 aa13.29□□□□□ -0.28
LSS-202ENST00000397728 OR14K1Q8NGZ2 314 aa13.29□□□□□ -0.28
LSS-202ENST00000397728 A0A0A6YYJ9 748 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 IGKV1D-43A0A0B4J1Z2 117 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 E5RGE8 158 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 IGHMP01871 453 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 ERVFRD-1P60508 538 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.28□□□□□ -0.28
LSS-202ENST00000397728 NSG2Q9Y328 171 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 C3orf85A0A1B0GTC6 90 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 RPL12P30050 165 aaKnown RBP13.28□□□□□ -0.28
LSS-202ENST00000397728 THBS3P49746 956 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 SFT2D1Q8WV19 159 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 AKIP1Q9NQ31 210 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 HILPDAQ9Y5L2 63 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 CST7O76096 145 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 GIPP09681 153 aaPredicted RBP13.28□□□□□ -0.28
LSS-202ENST00000397728 PPP1CCP36873 323 aaKnown RBP13.28□□□□□ -0.28
LSS-202ENST00000397728 OPRK1P41145 380 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 CEBPDP49716 269 aaPredicted RBP13.28□□□□□ -0.28
LSS-202ENST00000397728 FAM3AP98173 230 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 FAM74A1Q5RGS3 127 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 C1orf162Q8NEQ5 155 aaPredicted RBP13.28□□□□□ -0.28
LSS-202ENST00000397728 GINS3Q9BRX5 216 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.28□□□□□ -0.282e-9■■■□□ 18.4
LSS-202ENST00000397728 MPDZO75970 2070 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 ACKR3P25106 362 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 HLA-DRB3P79483 266 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 SPINK9Q5DT21 86 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 VSTM2AQ8TAG5 236 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 HDHD3Q9BSH5 251 aaPredicted RBP13.28□□□□□ -0.28
LSS-202ENST00000397728 THYN1Q9P016 225 aa13.28□□□□□ -0.28
LSS-202ENST00000397728 K7ENP7 123 aa13.27□□□□□ -0.28
LSS-202ENST00000397728 NDUFA2O43678 99 aa13.27□□□□□ -0.28
LSS-202ENST00000397728 ERVS71-1P61550 626 aa13.27□□□□□ -0.28
LSS-202ENST00000397728 ARF6P62330 175 aa13.27□□□□□ -0.28
LSS-202ENST00000397728 PEAR1Q5VY43 1037 aaPredicted RBP13.27□□□□□ -0.28
LSS-202ENST00000397728 BCL2L2Q92843 193 aaPredicted RBP13.27□□□□□ -0.28
LSS-202ENST00000397728 FAM206AQ9NX38 181 aa13.27□□□□□ -0.28
LSS-202ENST00000397728 WNK2Q9Y3S1 2297 aa13.27□□□□□ -0.28
LSS-202ENST00000397728 RPS10-NUDT3A0A1W2PQS6 291 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 OR7C2O60412 319 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 MPV17P39210 176 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 MMDQ15546 238 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 ZNF529Q6P280 563 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 PCNPQ8WW12 178 aaKnown RBP13.27□□□□□ -0.29
LSS-202ENST00000397728 NPAS1Q99742 590 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 CACNG5Q9UF02 275 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 SNRPGP15A8MWD9 76 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 IFNL4K9M1U5 179 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 FGF12P61328 243 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 ENDOGQ14249 297 aaKnown RBP13.27□□□□□ -0.29
LSS-202ENST00000397728 ZNF385CQ66K41 422 aaPredicted RBP13.27□□□□□ -0.29
LSS-202ENST00000397728 ZDHHC22Q8N966 263 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 RPL36A-HNRNPH2H7BZ11 118 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 K7EQM0 130 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 EFNB2P52799 333 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 CCDC144NLQ6NUI1 221 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 SLC51BQ86UW2 128 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 DOLPP1Q86YN1 238 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 C20orf24Q9BUV8 137 aa13.27□□□□□ -0.29
LSS-202ENST00000397728 GOLGB1Q14789 3259 aaKnown RBP13.26□□□□□ -0.29
LSS-202ENST00000397728 IGLV3-32A0A0A0MS00 114 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 LANCL1O43813 399 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 CSN1S1P47710 185 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 ACSM6Q6P461 480 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 ZNF596Q8TC21 504 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 CREBBPQ92793 2442 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.26□□□□□ -0.29
LSS-202ENST00000397728 NDUFB6O95139 128 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 OR2H2O95918 312 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 OR5AC1P0C628 307 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 TRAPPC2P0DI81 140 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 TRAPPC2BP0DI82 140 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 KIR2DS2P43631 304 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 LINC00596Q86U02 117 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 PPP1R1CQ8WVI7 109 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 PRO3102Q9H379 93 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 SEBOXQ9HB31 216 aaPredicted RBP13.26□□□□□ -0.29
LSS-202ENST00000397728 CCL28Q9NRJ3 127 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 MED13LQ71F56 2210 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 PPYP01298 95 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 ARG1P05089 322 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 LGALS7P47929 136 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 PPT1P50897 306 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 FOXF2Q12947 444 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 TMEM104Q8NE00 496 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 NMES1Q9C002 83 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 FRMPD3Q5JV73 1810 aa13.26□□□□□ -0.29
LSS-202ENST00000397728 IGHV2OR16-5A0A0B4J2B6 119 aa13.25□□□□□ -0.29
LSS-202ENST00000397728 TMEM8BA6NDV4 472 aa13.25□□□□□ -0.29
LSS-202ENST00000397728 PPP1R1AQ13522 171 aa13.25□□□□□ -0.29
LSS-202ENST00000397728 IL13RA2Q14627 380 aa13.25□□□□□ -0.29
LSS-202ENST00000397728 HARBI1Q96MB7 349 aa13.25□□□□□ -0.29
LSS-202ENST00000397728 NAA60Q9H7X0 242 aa13.25□□□□□ -0.29
LSS-202ENST00000397728 SIRT7Q9NRC8 400 aa13.25□□□□□ -0.29
LSS-202ENST00000397728 RCL1Q9Y2P8 373 aaKnown RBP13.25□□□□□ -0.29
LSS-202ENST00000397728 A0A1W2PN81 502 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms