RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 TK1P04183 234 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 COL8A2P25067 703 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 CCR6P51684 374 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 TMEM33P57088 247 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 ARPC4P59998 168 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 TRAT1Q6PIZ9 186 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 TERB2Q8NHR7 220 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 GIMAP1Q8WWP7 306 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 GAFA1Q96PS6 74 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 ALX4Q9H161 411 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-209ENST00000397036 NECAP2Q9NVZ3 263 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 METRNQ9UJH8 293 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 INMT-MINDY4F8WBC2 141 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 FABP7O15540 132 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 PMP2P02689 132 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 EFNA4P52798 201 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 IL13RA1P78552 427 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 ZNF660Q6AZW8 331 aaPredicted RBP11.35□□□□□ -0.59
MCF2L-209ENST00000397036 FAAP20Q6NZ36 180 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 SLC36A1Q7Z2H8 476 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 PEG10Q86TG7 708 aaKnown RBP11.35□□□□□ -0.59
MCF2L-209ENST00000397036 LHFPL1Q86WI0 220 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 ASCC1Q8N9N2 400 aaKnown RBP11.35□□□□□ -0.59
MCF2L-209ENST00000397036 OR4A4PQ8NGN8 299 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 COQ2Q96H96 371 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 LURAP1Q96LR2 239 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 MMP28Q9H239 520 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 PCDHB10Q9UN67 800 aa11.35□□□□□ -0.59
MCF2L-209ENST00000397036 USF3Q68DE3 2245 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 AKAP6Q13023 2319 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 A0A1B0GVG6 124 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 NKX6-3A6NJ46 265 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 NPIPB11E5RHQ5 1161 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 GYPAP02724 150 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 GSTT2P0CG29 244 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 OR5H8P0DN80 308 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 DAOP14920 347 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 GZMHP20718 246 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 ECI1P42126 302 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 HLA-DRB3P79483 266 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 SURF2Q15527 256 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-209ENST00000397036 HMGN3Q15651 99 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 KRBOX4Q5JUW0 171 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 IDO2Q6ZQW0 420 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 MUC20Q8N307 709 aaPredicted RBP11.34□□□□□ -0.59
MCF2L-209ENST00000397036 ZDHHC22Q8N966 263 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 DEFB108BQ8NET1 73 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 OR13C8Q8NGS7 320 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 OR6F1Q8NGZ6 308 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 MAFIPQ8WZ33 124 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 UPRTQ96BW1 309 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 SCGB3A2Q96PL1 93 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 CABLES2Q9BTV7 478 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 CHODLQ9H9P2 273 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 EHFQ9NZC4 300 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 TRAPPC2LQ9UL33 140 aa11.34□□□□□ -0.59
MCF2L-209ENST00000397036 DSCAMO60469 2012 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 HELZ2Q9BYK8 2649 aaKnown RBP11.33□□□□□ -0.6
MCF2L-209ENST00000397036 PRAF2O60831 178 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 DHFRP00374 187 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 IGHV2-70P01814 119 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 H2AFB2P0C5Z0 115 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 P2RX3P56373 397 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 TSPAN5P62079 268 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 AESQ08117 197 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 ATXN7L3Q14CW9 347 aaPredicted RBP11.33□□□□□ -0.6
MCF2L-209ENST00000397036 TMEM155Q4W5P6 130 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 C6orf183Q5T699 404 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 ZNF295-AS1Q8N0V1 137 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 ZNRF1Q8ND25 227 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 RAB1CQ92928 201 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 CCL13Q99616 98 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 TMEM246Q9BRR3 403 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 TOLLIPQ9H0E2 274 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 NUDT15Q9NV35 164 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 KCNIP1Q9NZI2 227 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 OR6C3Q9NZP0 311 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 KIF25Q9UIL4 384 aa11.33□□□□□ -0.6
MCF2L-209ENST00000397036 TANC2Q9HCD6 1990 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 SPG11Q96JI7 2443 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 MEIKINA0A087WXM9 373 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 ODAMA1E959 279 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 PEX14O75381 377 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 ZNF205O95201 554 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 IL5P05113 134 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 SCTP09683 121 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 RCC1P18754 421 aaPredicted RBP11.32□□□□□ -0.6
MCF2L-209ENST00000397036 RBMXP38159 391 aaKnown RBP11.32□□□□□ -0.6
MCF2L-209ENST00000397036 GLIPR1P48060 266 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 GLCCI1Q86VQ1 547 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 ZNF565Q8N9K5 539 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 CORO2AQ92828 525 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 TIMD4Q96H15 378 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 GINS4Q9BRT9 223 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 C20orf85Q9H1P6 137 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 RAB9BQ9NP90 201 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 SLC23A1Q9UHI7 598 aa11.32□□□□□ -0.6
MCF2L-209ENST00000397036 HRNRQ86YZ3 2850 aaPredicted RBP11.31□□□□□ -0.6
MCF2L-209ENST00000397036 TRBV6-7A0A0A0MS04 114 aa11.31□□□□□ -0.6
MCF2L-209ENST00000397036 SDCBPO00560 298 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms