RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SNRPD2P62316 118 aaKnown RBP10.61□□□□□ -0.71
TRIM39-204ENST00000396548 DHODHQ02127 395 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 CLEC18BQ6UXF7 455 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 ZNF788Q6ZQV5 615 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 CLEC18CQ8NCF0 446 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 HPS1Q92902 700 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 PPP1R14BQ96C90 147 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 SNX22Q96L94 193 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 TRAF4Q9BUZ4 470 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-204ENST00000396548 C5orf66Q9H5L9 145 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 TMEM106BQ9NUM4 274 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 NPIPB11E5RHQ5 1161 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 GOSR1O95249 250 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 FSTL3O95633 263 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 RRAS2P62070 204 aaPredicted RBP10.61□□□□□ -0.71
TRIM39-204ENST00000396548 HLA-DRB3P79483 266 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 ZNF626Q68DY1 528 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 MOB1BQ7L9L4 216 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 ZNF561Q8N587 486 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 BOLLQ8N9W6 283 aaKnown RBP10.61□□□□□ -0.71
TRIM39-204ENST00000396548 MARCH1Q8TCQ1 289 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 NEK7Q8TDX7 302 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 BEX2Q9BXY8 128 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 FXYD6Q9H0Q3 95 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 OR51J1Q9H342 316 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 BEX1Q9HBH7 125 aa10.61□□□□□ -0.71
TRIM39-204ENST00000396548 ZNF462Q96JM2 2506 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 DSCAML1Q8TD84 2053 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 A0A1B0GW55 424 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 FABP7O15540 132 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 TUSC2O75896 110 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 DUX4L2P0CJ85 424 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 DUX4L3P0CJ86 424 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 DUX4L4P0CJ87 422 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 DUX4L5P0CJ88 424 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 DUX4L6P0CJ89 424 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 DUX4L7P0CJ90 424 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 FPR2P25090 351 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 AESQ08117 197 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 SURF2Q15527 256 aaPredicted RBP10.6□□□□□ -0.71
TRIM39-204ENST00000396548 METTL11BQ5VVY1 283 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 DUX4L9Q6RFH8 374 aaPredicted RBP10.6□□□□□ -0.71
TRIM39-204ENST00000396548 ADAD2Q8NCV1 583 aaKnown RBP10.6□□□□□ -0.71
TRIM39-204ENST00000396548 TMEM185AQ8NFB2 350 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 OR4A4PQ8NGN8 299 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 OR6F1Q8NGZ6 308 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 IGFBPL1Q8WX77 278 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 TMEM230Q96A57 120 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 ST6GAL2Q96JF0 529 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 SPOCK3Q9BQ16 436 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 SEC22CQ9BRL7 303 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 ZNF2Q9BSG1 426 aaPredicted RBP10.6□□□□□ -0.71
TRIM39-204ENST00000396548 NCOR1P1Q9H4R4 102 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 DNAJB11Q9UBS4 358 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 DUX4Q9UBX2 424 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 FBXO9Q9UK97 447 aaPredicted RBP10.6□□□□□ -0.71
TRIM39-204ENST00000396548 COL12A1Q99715 3063 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 TRBV6-7A0A0A0MS04 114 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 KIR2DS1A0A191URI9 304 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 SNRPGP15A8MWD9 76 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 KIR2DS4P43632 304 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 KIR2DS1Q14954 304 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 CAPSLQ8WWF8 208 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 UTP20O75691 2785 aaKnown RBP10.6□□□□□ -0.71
TRIM39-204ENST00000396548 ICE1Q9Y2F5 2266 aa10.6□□□□□ -0.71
TRIM39-204ENST00000396548 USP9XQ93008 2570 aaPredicted RBP10.59□□□□□ -0.71
TRIM39-204ENST00000396548 TMEM30CPA0ZSE6 113 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 LRRC30A6NM36 301 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 RP2O75695 350 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 ZNF205O95201 554 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 DIRAS3O95661 229 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 TK1P04183 234 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 NPY4RP50391 375 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 TMEM17Q86X19 198 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 ZNRF1Q8ND25 227 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 TMPRSS13Q9BYE2 586 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 DOPEY1Q5JWR5 2465 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 TRAV39A0A0B4J263 110 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 IGHV1-69-2A0A0G2JMI3 117 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 LGALS8O00214 317 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 OR4E1P0C645 316 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 GLIPR1P48060 266 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 FAHD2BQ6P2I3 314 aaPredicted RBP10.59□□□□□ -0.71
TRIM39-204ENST00000396548 MEX3BQ6ZN04 569 aaKnown RBP10.59□□□□□ -0.71
TRIM39-204ENST00000396548 LDLRAD3Q86YD5 345 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 OR52B4Q8NGK2 314 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 MOB3AQ96BX8 217 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 FAHD2AQ96GK7 314 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 TOLLIPQ9H0E2 274 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 DNTTIP1Q9H147 329 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 MGAT4AQ9UM21 535 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 IRF2P14316 349 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 ZBTB25P24278 435 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 COL8A2P25067 703 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 UCP3P55916 312 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 TSPAN5P62079 268 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 CD276Q5ZPR3 534 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 ZNF554Q86TJ5 538 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 OR11H7Q8NGC8 314 aa10.59□□□□□ -0.71
TRIM39-204ENST00000396548 CCDC107Q8WV48 283 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms