RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 FGF16O43320 207 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 OR7C1O76099 320 aaPredicted RBP13.05□□□□□ -0.32
DDR1-229ENST00000396342 GAPDHP04406 335 aaKnown RBP13.05□□□□□ -0.32
DDR1-229ENST00000396342 MYL12AP19105 171 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 SOX2P48431 317 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 GNG10P50151 68 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 GP2P55259 537 aaKnown RBP13.05□□□□□ -0.32
DDR1-229ENST00000396342 GPR176Q14439 515 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 CCDC58Q4VC31 144 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 SLC35E3Q7Z769 313 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 MOB3BQ86TA1 216 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 LINC00596Q86U02 117 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 DRAM1Q8N682 238 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 MRGPRDQ8TDS7 321 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 DPCDQ9BVM2 203 aaPredicted RBP13.05□□□□□ -0.32
DDR1-229ENST00000396342 PPIL3Q9H2H8 161 aaKnown RBP13.05□□□□□ -0.32
DDR1-229ENST00000396342 ST3GAL6Q9Y274 331 aa13.05□□□□□ -0.32
DDR1-229ENST00000396342 TMEM30CPA0ZSE6 113 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
DDR1-229ENST00000396342 HNF4GQ14541 408 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 CDK5R1Q15078 307 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 C17orf58Q2M2W7 97 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 ATAD3CQ5T2N8 411 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 RPL22L1Q6P5R6 122 aaKnown RBP13.04□□□□□ -0.32
DDR1-229ENST00000396342 BAIAP2L2Q6UXY1 529 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 RFESDQ8TAC1 157 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 PDCD1LG2Q9BQ51 273 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 ISG20L2Q9H9L3 353 aaKnown RBP13.04□□□□□ -0.32
DDR1-229ENST00000396342 SPACA1Q9HBV2 294 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 AMBNQ9NP70 447 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 TMEM138Q9NPI0 162 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 PSG11Q9UQ72 335 aa13.04□□□□□ -0.32
DDR1-229ENST00000396342 LOC100130705A0A1B0GUX0 176 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 SH2D7A6NKC9 451 aaPredicted RBP13.03□□□□□ -0.32
DDR1-229ENST00000396342 LY6LH3BQJ8 138 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 CCRL2O00421 344 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 IGHV3-7P01780 117 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 ZNF93P35789 620 aaPredicted RBP13.03□□□□□ -0.32
DDR1-229ENST00000396342 GDNFP39905 211 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 ZP1P60852 638 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 VAX1Q5SQQ9 334 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 DDI2Q5TDH0 399 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 OR13A1Q8NGR1 328 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 OR52N1Q8NH53 320 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 RHOXF1Q8NHV9 184 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 TMEM106AQ96A25 262 aa13.03□□□□□ -0.32
DDR1-229ENST00000396342 SDCBPO00560 298 aaPredicted RBP13.02□□□□□ -0.33
DDR1-229ENST00000396342 GABRPO00591 440 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 HSD17B6O14756 317 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 SPINT2O43291 252 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 IGKV1D-33P01593 117 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 IGKV1-33P01594 117 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 GTF2F2P13984 249 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 DCKP27707 260 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 BDKRB2P30411 391 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 CD69Q07108 199 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 SUMF2Q8NBJ7 301 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 OR51A2Q8NGJ7 313 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 OR10K1Q8NGX5 313 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 OR2T10Q8NGZ9 312 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 LEAP2Q969E1 77 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 ARL11Q969Q4 196 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 RNF166Q96A37 237 aaPredicted RBP13.02□□□□□ -0.33
DDR1-229ENST00000396342 RASL11BQ9BPW5 248 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 TAS2R4Q9NYW5 299 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 NOTCH3Q9UM47 2321 aa13.02□□□□□ -0.33
DDR1-229ENST00000396342 TRAV24A0A0B4J272 114 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 AP4M1O00189 453 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 TXNL1O43396 289 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 SERPINA2P20848 420 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 MYCNOSP40205 109 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 RAB25P57735 213 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 RPL23AP62750 156 aaKnown RBP13.01□□□□□ -0.33
DDR1-229ENST00000396342 PAX5Q02548 391 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 RIPK1Q13546 671 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 MPV17LQ2QL34 196 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 TMEM30BQ3MIR4 351 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 PIGYQ3MUY2 71 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 TEX38Q6PEX7 206 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 ZNF329Q86UD4 541 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 OR52I1Q8NGK6 324 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 LINC00574Q9H8X3 128 aa13.01□□□□□ -0.33
DDR1-229ENST00000396342 MCRIP1C9JLW8 97 aa13□□□□□ -0.33
DDR1-229ENST00000396342 NPIPB11E5RHQ5 1161 aa13□□□□□ -0.33
DDR1-229ENST00000396342 RBM11P57052 281 aaKnown RBP13□□□□□ -0.33
DDR1-229ENST00000396342 TCTEX1D4Q5JR98 221 aa13□□□□□ -0.33
DDR1-229ENST00000396342 CXorf66Q5JRM2 361 aaPredicted RBP13□□□□□ -0.33
DDR1-229ENST00000396342 C6orf183Q5T699 404 aa13□□□□□ -0.33
DDR1-229ENST00000396342 RSBN1Q5VWQ0 802 aaPredicted RBP13□□□□□ -0.33
DDR1-229ENST00000396342 ZNF695Q8IW36 515 aa13□□□□□ -0.33
DDR1-229ENST00000396342 C5orf56Q8N8D9 126 aa13□□□□□ -0.33
DDR1-229ENST00000396342 KLHL30-AS1Q8NEE0 82 aa13□□□□□ -0.33
DDR1-229ENST00000396342 OR52M1Q8NGK5 317 aa13□□□□□ -0.33
DDR1-229ENST00000396342 FAM53CQ9NYF3 392 aa13□□□□□ -0.33
DDR1-229ENST00000396342 IL36GQ9NZH8 169 aa13□□□□□ -0.33
DDR1-229ENST00000396342 GNG12Q9UBI6 72 aa13□□□□□ -0.33
DDR1-229ENST00000396342 TRAPPC2LQ9UL33 140 aa13□□□□□ -0.33
DDR1-229ENST00000396342 FAM90A18PA6NE21 464 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 FAM90A16PA6NEW6 464 aa12.99□□□□□ -0.33
DDR1-229ENST00000396342 FAM90A20PA6NIJ5 464 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms