RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 Q6ZVH6 145 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 CLDN22Q8N7P3 220 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR4K17Q8NGC6 315 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR6N1Q8NGY5 312 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR51Q1Q8NH59 317 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 SKA2Q8WVK7 121 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 TMEM234Q8WY98 164 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 TCEAL3Q969E4 200 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 NEURL3Q96EH8 262 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 SMIM12Q96EX1 92 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 MRAP2Q96G30 205 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 DOK1Q99704 481 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 KIFC1Q9BW19 673 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 PECRQ9BY49 303 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR52D1Q9H346 318 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 TXNIPQ9H3M7 391 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 BIN3Q9NQY0 253 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 TBX21Q9UL17 535 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 SIGLEC9Q9Y336 463 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 CDC42BPBQ9Y5S2 1711 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 PTPRGP23470 1445 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 ZBED9Q6R2W3 1325 aa3.18□□□□□ -1.9
HMGB1P10-201ENST00000395823 PBRM1Q86U86 1689 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 LRP4O75096 1905 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 NID2Q14112 1375 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 METTL15A6NJ78 407 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 CLDN24A6NM45 220 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 KRBOX1C9JBD0 128 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 LINC01619G3V211 115 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 TNFRSF11BO00300 401 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 SOCS1O15524 211 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 PLIN3O60664 434 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 CNMDO75829 334 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 SULT1C4O75897 302 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 SLC25A14O95258 325 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 HAND1O96004 215 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 IFNA1P01562 189 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 CD8AP01732 235 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 FAM228BP0C875 321 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 C1GALT1C1LP0DN25 315 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 AKR1C4P17516 323 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 MYL9P24844 172 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 S100GP29377 79 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 ADORA1P30542 326 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 PMELP40967 661 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 ERFP50548 548 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 CLDN12P56749 244 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 RAB38P57729 211 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR12D2P58182 307 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 CDC42P60953 191 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 RAB2AP61019 212 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 LOXL1Q08397 574 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 DEFB116Q30KQ4 102 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 KDM4DQ6B0I6 523 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 ELP2Q6IA86 826 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 RPL13AP3Q6NVV1 102 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 ZFP1Q6P2D0 407 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 EPGNQ6UW88 154 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 OLIG3Q7RTU3 272 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 FAM19A5Q7Z5A7 132 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 SPICQ8N5J4 248 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR5W2Q8NH69 310 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 Q8WTZ3 238 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 TNFAIP8L1Q8WVP5 186 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 TMBIM1Q969X1 311 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 ZMYND19Q96E35 227 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 PDXPQ96GD0 296 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 KCNS1Q96KK3 526 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 TMEM243Q9BU79 118 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 TMEM138Q9NPI0 162 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR12D3Q9UGF7 316 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 ZNF223Q9UK11 482 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 ZNF222Q9UK12 451 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 TP53TG1Q9Y2A0 90 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 PRRC2AP48634 2157 aaKnown RBP3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 DIP2BQ9P265 1576 aa3.17□□□□□ -1.9
HMGB1P10-201ENST00000395823 GPATCH8Q9UKJ3 1502 aaKnown RBP3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 A0A0G2JMP0 313 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR6C6A6NF89 314 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 SMIM9A6NGZ8 99 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 F8W036 122 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 M0R1B8 84 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 KPNA4O00629 521 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 TCAPO15273 167 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 ZNF207O43670 478 aaKnown RBP3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 PFDN1O60925 122 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 REM1O75628 298 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 COX4I1P13073 169 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 HIST1H1TP22492 207 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 PSMB9P28065 219 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 RPL12P30050 165 aaKnown RBP3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 PYCR1P32322 319 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 NOVP48745 357 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 SNAP25P60880 206 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 PSPHP78330 225 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 CDK5Q00535 292 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 OR2F1Q13607 317 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 PMVKQ15126 192 aa3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 SNRNP35Q16560 246 aaKnown RBP3.16□□□□□ -1.9
HMGB1P10-201ENST00000395823 HLA-DRB5Q30154 266 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms