RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 C17orf98A8MV24 154 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 TCF21O43680 179 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 VENTXO95231 258 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 ZNF728P0DKX0 622 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 KRBOX4Q5JUW0 171 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 ATAD3CQ5T2N8 411 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 PLPPR1Q8TBJ4 325 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 CYYR1Q96J86 154 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 DPCDQ9BVM2 203 aaPredicted RBP13.54□□□□□ -0.24
CXCL1-201ENST00000395761 CST11Q9H112 138 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 LINC00312Q9Y6C7 94 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 ATRQ13535 2644 aa13.54□□□□□ -0.24
CXCL1-201ENST00000395761 ODAMA1E959 279 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 MPIG6BO95866 241 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 PAHP00439 452 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 CSN2P05814 226 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 SNRPBP14678 240 aaKnown RBP13.53□□□□□ -0.24
CXCL1-201ENST00000395761 RAB6AP20340 208 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 BPIFB3P59826 476 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 UNC119Q13432 240 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 MPV17LQ2QL34 196 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 CNPY1Q3B7I2 92 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 KRTAP21-3Q3LHN1 58 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 ZNF782Q6ZMW2 699 aaPredicted RBP13.53□□□□□ -0.24
CXCL1-201ENST00000395761 LINC00596Q86U02 117 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 ZNF418Q8TF45 676 aaPredicted RBP13.53□□□□□ -0.24
CXCL1-201ENST00000395761 Q96M66 194 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 CMTM3Q96MX0 182 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 ZNF714Q96N38 554 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 DCUN1D5Q9BTE7 237 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 SUCNR1Q9BXA5 334 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 KIF25Q9UIL4 384 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 RAB22AQ9UL26 194 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 ETV7Q9Y603 341 aa13.53□□□□□ -0.24
CXCL1-201ENST00000395761 A0A0B4J203 849 aa13.52□□□□□ -0.25
CXCL1-201ENST00000395761 TMEM272A0A1B0GTI8 110 aa13.52□□□□□ -0.25
CXCL1-201ENST00000395761 FUOMA2VDF0 154 aa13.52□□□□□ -0.25
CXCL1-201ENST00000395761 DEFB112Q30KQ8 113 aa13.52□□□□□ -0.25
CXCL1-201ENST00000395761 RSBN1Q5VWQ0 802 aaPredicted RBP13.52□□□□□ -0.25
CXCL1-201ENST00000395761 NCR3LG1Q68D85 454 aa13.52□□□□□ -0.25
CXCL1-201ENST00000395761 SIGIRRQ6IA17 410 aa13.52□□□□□ -0.25
CXCL1-201ENST00000395761 MZT2AQ6P582 158 aa13.52□□□□□ -0.25
CXCL1-201ENST00000395761 TRAPPC6BQ86SZ2 158 aa13.52□□□□□ -0.25
CXCL1-201ENST00000395761 CORO2AQ92828 525 aa13.52□□□□□ -0.25
CXCL1-201ENST00000395761 FBN1P35555 2871 aaKnown RBP13.52□□□□□ -0.25
CXCL1-201ENST00000395761 MEIKINA0A087WXM9 373 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 TRAV39A0A0B4J263 110 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 A0A0U1RQK1 487 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 MMP23AO75900 390 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 COX7A1P24310 79 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 UBE2E1P51965 193 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 HILS1P60008 231 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 RPS27AP62979 156 aaKnown RBP13.51□□□□□ -0.25
CXCL1-201ENST00000395761 GUCA2AQ02747 115 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 FAM189A2Q15884 450 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 FAM89BQ8N5H3 189 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 OR13A1Q8NGR1 328 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 OR5H6Q8NGV6 325 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 LGALS14Q8TCE9 139 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 TM2D1Q9BX74 207 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 ABCG5Q9H222 651 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 MMP27Q9H306 513 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 ESM1Q9NQ30 184 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 RCC2Q9P258 522 aaKnown RBP13.51□□□□□ -0.25
CXCL1-201ENST00000395761 UBE2J1Q9Y385 318 aaPredicted RBP13.51□□□□□ -0.25
CXCL1-201ENST00000395761 DSCAML1Q8TD84 2053 aa13.51□□□□□ -0.25
CXCL1-201ENST00000395761 TRGV10A0A0A0MS01 117 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 hCG_1809904A0A1W2PP81 198 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 A0A1W2PPE2 198 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 A0A1W2PR64 198 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 A0A1W2PRV1 198 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A10PA6NDY2 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A18PA6NE21 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A16PA6NEW6 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A20PA6NIJ5 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A8PA6NJQ4 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A7PA6NKC0 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A22PA8MWA6 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A12PA8MX19 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A5PA8MXJ8 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A23PA8MXZ1 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 NPFFO15130 113 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A15PP0C7V4 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A13PP0C7W8 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A14PP0C7W9 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 FAM90A24PP0C7X0 464 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 IGHV1-8P0DP01 117 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 KCNJ3P48549 501 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 PLA2G7Q13093 441 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 RAB12Q6IQ22 244 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 BAIAP2L2Q6UXY1 529 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 ZDHHC22Q8N966 263 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 MCFD2Q8NI22 146 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 NEK7Q8TDX7 302 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 MDFIQ99750 246 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 NICN1Q9BSH3 213 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 URM1Q9BTM9 101 aaKnown RBP13.5□□□□□ -0.25
CXCL1-201ENST00000395761 TMEM59Q9BXS4 323 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 LPAR5Q9H1C0 372 aa13.5□□□□□ -0.25
CXCL1-201ENST00000395761 HEXA-AS1Q9H8Q6 139 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms