RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 NANOS1Q8WY41 292 aaKnown RBP11.91□□□□□ -0.5
SNCA-204ENST00000394989 ZNF251Q9BRH9 671 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 ANKRD30BLA7E2S9 258 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 RHBDL1O75783 438 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 LYZL6O75951 148 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 ARG1P05089 322 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 H2AFB1P0C5Y9 115 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 S100A10P60903 97 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 HERPUD1Q15011 391 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 Q6ZS49 121 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 RHOVQ96L33 236 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 TRIB1Q96RU8 372 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 RHOFQ9HBH0 211 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 Q9N2K0 584 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 TUBD1Q9UJT1 453 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 MPC1Q9Y5U8 109 aa11.91□□□□□ -0.5
SNCA-204ENST00000394989 PPYP01298 95 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 SFTA3P0C7M3 94 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 ERVS71-1P61550 626 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 ABCA11PQ4W5N1 156 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 C17orf78Q8N4C9 275 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 OR5L1Q8NGL2 311 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 HIST1H2AAQ96QV6 131 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 SLC5A7Q9GZV3 580 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 DCHS1Q96JQ0 3298 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 C9JQL5 133 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 SMPD2O60906 423 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 IFNA4P05014 189 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 SCTP09683 121 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 UCP3P55916 312 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 MPV17LQ2QL34 196 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 C20orf204Q6ZNR8 217 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 FAM214BQ7L5A3 538 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 WDR86Q86TI4 376 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 MSI2Q96DH6 328 aaKnown RBP11.9□□□□□ -0.5
SNCA-204ENST00000394989 SMIM3Q9BZL3 60 aa11.9□□□□□ -0.5
SNCA-204ENST00000394989 ATMQ13315 3056 aa11.9□□□□□ -0.51
SNCA-204ENST00000394989 NOVA1P51513 510 aaKnown RBP11.89□□□□□ -0.51
SNCA-204ENST00000394989 GNG3P63215 75 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 PDZD11Q5EBL8 140 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 CDPF1Q6NVV7 123 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 LYZL2Q7Z4W2 148 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 CNTNAP3Q9BZ76 1288 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 OR51I2Q9H344 312 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 PLSCR2Q9NRY7 297 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 OR5B21A6NL26 309 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 COLCA2A8K830 154 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 TBC1D28Q2M2D7 210 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 CLEC9AQ6UXN8 241 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 BAP18Q8IXM2 172 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 OR2J1Q9GZK6 312 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 KCNIP3Q9Y2W7 256 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 IGKV1-6A0A0C4DH72 117 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 LRP3O75074 770 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 HKR1P10072 659 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 RCC1P18754 421 aaPredicted RBP11.89□□□□□ -0.51
SNCA-204ENST00000394989 GNRHRP30968 328 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 IDH3GP51553 393 aaPredicted RBP11.89□□□□□ -0.51
SNCA-204ENST00000394989 IL24Q13007 206 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 GABRA6Q16445 453 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 SRSF7Q16629 238 aaKnown RBP eCLIP11.89□□□□□ -0.51
SNCA-204ENST00000394989 OR2A2Q6IF42 318 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 FBXW12Q6X9E4 464 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 ZNF573Q86YE8 665 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 FAM24BQ8N5W8 94 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 LRTM2Q8N967 370 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 SUMF2Q8NBJ7 301 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 RNF141Q8WVD5 230 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 SECTM1Q8WVN6 248 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 C18orf12Q96KH6 178 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 GLRX2Q9NS18 164 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 NBEAQ8NFP9 2946 aa11.89□□□□□ -0.51
SNCA-204ENST00000394989 TRAV24A0A0B4J272 114 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 PET100P0DJ07 73 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 TPT1P13693 172 aaKnown RBP11.88□□□□□ -0.51
SNCA-204ENST00000394989 GLP1RP43220 463 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 NAAAQ02083 359 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 TCF15Q12870 199 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 ALKBH6Q3KRA9 238 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 IGF2-ASQ6U949 168 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 Q6ZT83 130 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 TP53RKQ96S44 253 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 NRIP2Q9BQI9 281 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 DNAJB11Q9UBS4 358 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 MEMO1Q9Y316 297 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 A0A1W2PPH5 198 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 MED6O75586 246 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 DEDDO75618 318 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 KIR2DL2P43627 348 aaPredicted RBP11.88□□□□□ -0.51
SNCA-204ENST00000394989 CEBPGP53567 150 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 DEFB109BQ30KR1 87 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 VWA1Q6PCB0 445 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 LIAT1Q6ZQX7 453 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 C9orf106Q8NAJ2 232 aa11.88□□□□□ -0.51
SNCA-204ENST00000394989 AQP7O14520 342 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 CLN5O75503 358 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 YIF1AO95070 293 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 UQCC3Q6UW78 93 aa11.87□□□□□ -0.51
SNCA-204ENST00000394989 MRPL30Q8TCC3 161 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms