RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 A0A1W2PPE3 182 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 A0A1W2PPI3 338 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 ZNF729A6NN14 1252 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-205ENST00000394892 F2RL2O00254 374 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 HTR3BO95264 441 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 IL1AP01583 271 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 PRB2P02812 416 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-205ENST00000394892 OCM2P0CE71 109 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 OCMP0CE72 109 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-205ENST00000394892 GLP1RP43220 463 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 RBM11P57052 281 aaKnown RBP7.05□□□□□ -1.28
ATG4A-205ENST00000394892 CD83Q01151 205 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 NSUN5P1Q3KNT7 163 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 NHLRC3Q5JS37 347 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 DDI2Q5TDH0 399 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 TTC23Q5W5X9 447 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 SIGIRRQ6IA17 410 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 RTN4RL2Q86UN3 420 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 DHRSXQ8N5I4 330 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 PACRGLQ8N7B6 248 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 MRGPRDQ8TDS7 321 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 NRG4Q8WWG1 115 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 OR14A2Q96R54 314 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 DPCDQ9BVM2 203 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-205ENST00000394892 PRSS22Q9GZN4 317 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 GAL3ST2Q9H3Q3 398 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 IFT22Q9H7X7 185 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 TMEM138Q9NPI0 162 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 ABCB10Q9NRK6 738 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 ING4Q9UNL4 249 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 PSG11Q9UQ72 335 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 ST3GAL6Q9Y274 331 aa7.05□□□□□ -1.28
ATG4A-205ENST00000394892 NOTCH3Q9UM47 2321 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 PNMA8CA0A1B0GUJ8 204 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 LEUTXA8MZ59 168 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 J3QR06 171 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 FBXO24O75426 580 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 NFYBP25208 207 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 BDKRB2P30411 391 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 ZNF93P35789 620 aaPredicted RBP7.04□□□□□ -1.28
ATG4A-205ENST00000394892 CAPGP40121 348 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 VHLP40337 213 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 EMX1Q04741 257 aaPredicted RBP7.04□□□□□ -1.28
ATG4A-205ENST00000394892 RSU1Q15404 277 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 LTC4SQ16873 150 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 Q499Y3 187 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 FAM27D1Q5T7N8 215 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 OR52W1Q6IF63 320 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 TMPRSS11AQ6ZMR5 421 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 OSR2Q8N2R0 312 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 TMEM104Q8NE00 496 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 OR4D6Q8NGJ1 314 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 HAVCR2Q8TDQ0 301 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 TFAP2CQ92754 450 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 KCTD12Q96CX2 325 aaKnown RBP7.04□□□□□ -1.28
ATG4A-205ENST00000394892 RBM14Q96PK6 669 aaKnown RBP7.04□□□□□ -1.28
ATG4A-205ENST00000394892 DERL3Q96Q80 235 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 GPER1Q99527 375 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 ZNF184Q99676 751 aaPredicted RBP7.04□□□□□ -1.28
ATG4A-205ENST00000394892 FAM192AQ9GZU8 254 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 PLCXD1Q9NUJ7 323 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 NECAP2Q9NVZ3 263 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 PAK1IP1Q9NWT1 392 aaPredicted RBP7.04□□□□□ -1.28
ATG4A-205ENST00000394892 IDI2-AS1Q9NZ38 188 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 OR6C3Q9NZP0 311 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 PITPNC1Q9UKF7 332 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 DSCAML1Q8TD84 2053 aa7.04□□□□□ -1.28
ATG4A-205ENST00000394892 FUOMA2VDF0 154 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 SLC31A2O15432 143 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 OR2F2O95006 317 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 MT-ND4P03905 459 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 FSTP19883 344 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 SERPINA2P20848 420 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 VDAC2P45880 294 aaPredicted RBP7.03□□□□□ -1.28
ATG4A-205ENST00000394892 RIPK1Q13546 671 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 RBM39Q14498 530 aaKnown RBP7.03□□□□□ -1.28
ATG4A-205ENST00000394892 SLC22A6Q4U2R8 563 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 ABCA11PQ4W5N1 156 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 YIF1BQ5BJH7 314 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 OXLD1Q5BKU9 147 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 VAX1Q5SQQ9 334 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 UNQ9370/PRO34162Q6UXP9 181 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 ZNF497Q6ZNH5 498 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 AHSA2Q719I0 299 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 GAPTQ8N292 157 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 DRAM1Q8N682 238 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 NANOGP1Q8N7R0 232 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 OR9G1Q8NH87 305 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 ZNF596Q8TC21 504 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 CCDC107Q8WV48 283 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 STMN2Q93045 179 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 MUL1Q969V5 352 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 MYCBPQ99417 103 aaPredicted RBP7.03□□□□□ -1.28
ATG4A-205ENST00000394892 SLC25A33Q9BSK2 321 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 METTL9Q9H1A3 318 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 LIN7BQ9HAP6 207 aa7.03□□□□□ -1.28
ATG4A-205ENST00000394892 CNOT2Q9NZN8 540 aaKnown RBP7.03□□□□□ -1.28
ATG4A-205ENST00000394892 RCC2Q9P258 522 aaKnown RBP7.03□□□□□ -1.28
ATG4A-205ENST00000394892 LSM2Q9Y333 95 aaKnown RBP7.03□□□□□ -1.28
ATG4A-205ENST00000394892 PCDHGB5Q9Y5G0 923 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms