RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 P2RX4Q99571 388 aa13.83□□□□□ -0.2
SNRPA1-202ENST00000394082 IFT22Q9H7X7 185 aa13.83□□□□□ -0.2
SNRPA1-202ENST00000394082 SAC3D1A6NKF1 404 aa13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 TMEM11P17152 192 aa13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 GP2P55259 537 aaKnown RBP13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 SLC35B1P78383 322 aa13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 ZNF816Q0VGE8 651 aaPredicted RBP13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 NHLRC3Q5JS37 347 aa13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 ZNF329Q86UD4 541 aa13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 OR5AK2Q8NH90 309 aa13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 ZNF649Q9BS31 505 aa13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 ALG8Q9BVK2 526 aa13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 ING3Q9NXR8 418 aa13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 DHDHQ9UQ10 334 aa13.82□□□□□ -0.2
SNRPA1-202ENST00000394082 MAGEB3O15480 346 aa13.81□□□□□ -0.2
SNRPA1-202ENST00000394082 MPZL2O60487 215 aa13.81□□□□□ -0.2
SNRPA1-202ENST00000394082 FADS2O95864 444 aaKnown RBP13.81□□□□□ -0.2
SNRPA1-202ENST00000394082 GABRB1P18505 474 aa13.81□□□□□ -0.2
SNRPA1-202ENST00000394082 RAB3AP20336 220 aa13.81□□□□□ -0.2
SNRPA1-202ENST00000394082 GZMHP20718 246 aa13.81□□□□□ -0.2
SNRPA1-202ENST00000394082 HOXD3P31249 432 aaPredicted RBP13.81□□□□□ -0.2
SNRPA1-202ENST00000394082 ALDH3A2P51648 485 aa13.81□□□□□ -0.2
SNRPA1-202ENST00000394082 FOXRED2Q8IWF2 684 aa13.81□□□□□ -0.2
SNRPA1-202ENST00000394082 C8orf31Q8N9H6 132 aa13.81□□□□□ -0.2
SNRPA1-202ENST00000394082 OR52M1Q8NGK5 317 aa13.81□□□□□ -0.2
SNRPA1-202ENST00000394082 SERPINE3A8MV23 424 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 H0YHG0 523 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 EI24O14681 340 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 CD69Q07108 199 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 RAB40BQ12829 278 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 HES1Q14469 280 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 KLHL22Q53GT1 634 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 C11orf87Q6NUJ2 197 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 UNQ9370/PRO34162Q6UXP9 181 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 SLC35E3Q7Z769 313 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 LHFPL3Q86UP9 236 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 TGIF2LXQ8IUE1 241 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 IZUMO1Q8IYV9 350 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 STPG2Q8N412 459 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 OR10X1Q8NGY0 326 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 Q96MT0 163 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 WWC2-AS2Q96NR7 200 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 GON7Q9BXV9 100 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 ISG20L2Q9H9L3 353 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 MRPS18AQ9NVS2 196 aaKnown RBP13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 ERVK13-1Q9NX77 482 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 IL36GQ9NZH8 169 aa13.8□□□□□ -0.2
SNRPA1-202ENST00000394082 CCRL2O00421 344 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 GABRPO00591 440 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 HSPB6O14558 160 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 RAMP3O60896 148 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 IGKV1D-33P01593 117 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 IGKV1-33P01594 117 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 GAPDHP04406 335 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 GBX2P52951 348 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 DIAPH2-AS1Q14236 149 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 Q3ZCU0 254 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 TEX38Q6PEX7 206 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 C8orf86Q6ZUL3 223 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 LINC00596Q86U02 117 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 ZNF695Q8IW36 515 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 LINC00311Q8N616 119 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 PLPPR1Q8TBJ4 325 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 MRGPRDQ8TDS7 321 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 TNFAIP8L1Q8WVP5 186 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 LEAP2Q969E1 77 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 NOL4LQ96MY1 436 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 NR1H4Q96RI1 486 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 PDCD1LG2Q9BQ51 273 aa13.79□□□□□ -0.2
SNRPA1-202ENST00000394082 AP4M1O00189 453 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 HSD17B6O14756 317 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 SSTR5P35346 364 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 RSU1Q15404 277 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 ZSCAN26Q16670 478 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 CCDC58Q4VC31 144 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 Q8N6K4 173 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 RNF152Q8N8N0 203 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 KLHL30-AS1Q8NEE0 82 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 RHOXF1Q8NHV9 184 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 RFESDQ8TAC1 157 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 TSEN15Q8WW01 171 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 GPER1Q99527 375 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 DPCDQ9BVM2 203 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 JAM3Q9BX67 310 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 ABCG5Q9H222 651 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 LIN7CQ9NUP9 197 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 FAM118AQ9NWS6 357 aa13.78□□□□□ -0.2
SNRPA1-202ENST00000394082 IGHV1-3A0A0C4DH29 117 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 NUDT19A8MXV4 375 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 E9PI62 339 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 IGHV3-7P01780 117 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 CD2P06729 351 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 NHLRC4P0CG21 123 aaPredicted RBP13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 DGCR2P98153 550 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 HNF4GQ14541 408 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 PIGYQ3MUY2 71 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 ZFP1Q6P2D0 407 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 SUMF2Q8NBJ7 301 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 OR8H1Q8NGG4 311 aa13.77□□□□□ -0.21
SNRPA1-202ENST00000394082 OR51A2Q8NGJ7 313 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms