RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 RTBDNQ9BSG5 229 aaPredicted RBP7.26□□□□□ -1.25
TDP1-203ENST00000393454 EGLN1Q9GZT9 426 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 LIME1Q9H400 295 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 NPTNQ9Y639 398 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 HCFC1P51610 2035 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 MEIKINA0A087WXM9 373 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 TMEM30CPA0ZSE6 113 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 C9orf170A2RU37 121 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 LRRC30A6NM36 301 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.26□□□□□ -1.25
TDP1-203ENST00000393454 IFNL4K9M1U5 179 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 DIRAS3O95661 229 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 AADACP22760 399 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 ZBTB25P24278 435 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 LMO1P25800 156 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 HLA-DRB3P79483 266 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 AESQ08117 197 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 SURF2Q15527 256 aaPredicted RBP7.26□□□□□ -1.25
TDP1-203ENST00000393454 ABCA11PQ4W5N1 156 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 TMEM128Q5BJH2 165 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 SHEQ5VZ18 495 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 ZNF660Q6AZW8 331 aaPredicted RBP7.26□□□□□ -1.25
TDP1-203ENST00000393454 FAHD2BQ6P2I3 314 aaPredicted RBP7.26□□□□□ -1.25
TDP1-203ENST00000393454 MOB1BQ7L9L4 216 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 NOXA1Q86UR1 476 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 FAM90A1Q86YD7 464 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 PRR18Q8N4B5 295 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 SPICQ8N5J4 248 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 DEFB108BQ8NET1 73 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 TMEM185AQ8NFB2 350 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 OR2AK2Q8NG84 335 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 ZFAND1Q8TCF1 268 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 IL1F10Q8WWZ1 152 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 ERGIC1Q969X5 290 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 FAHD2AQ96GK7 314 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 SAP30LQ9HAJ7 183 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 SLC23A1Q9UHI7 598 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 DYSFO75923 2080 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 ADGRG4Q8IZF6 3080 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 PKDREJQ9NTG1 2253 aa7.26□□□□□ -1.25
TDP1-203ENST00000393454 SPTBN1Q01082 2364 aaKnown RBP7.25□□□□□ -1.25
TDP1-203ENST00000393454 IGKV1D-17A0A075B6S4 117 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 CEACAM18A8MTB9 384 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 B9A039 149 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 SIAH2O43255 324 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 SLC22A5O76082 557 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 SIX6O95475 246 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 LHBP01229 141 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 CTXN2P0C2S0 81 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 OR3A1P47881 315 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 TESK1Q15569 626 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 SLC9A3R2Q15599 337 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 C2orf68Q2NKX9 166 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 KRBOX4Q5JUW0 171 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 LIN54Q6MZP7 749 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 ZNF880Q6PDB4 577 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 KCTD9Q7L273 389 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 NLRC3Q7RTR2 1065 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 PEG10Q86TG7 708 aaKnown RBP7.25□□□□□ -1.25
TDP1-203ENST00000393454 ZNF808Q8N4W9 903 aaPredicted RBP7.25□□□□□ -1.25
TDP1-203ENST00000393454 OR4A4PQ8NGN8 299 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 UBALD1Q8TB05 177 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 ITLN2Q8WWU7 325 aaPredicted RBP7.25□□□□□ -1.25
TDP1-203ENST00000393454 TMEM230Q96A57 120 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 KIRREL1Q96J84 757 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 PHB2Q99623 299 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 DHRS9Q9BPW9 319 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 FXYD6Q9H0Q3 95 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 CLEC4MQ9H2X3 399 aaPredicted RBP7.25□□□□□ -1.25
TDP1-203ENST00000393454 MS4A5Q9H3V2 200 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 KCNIP1Q9NZI2 227 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 KIF25Q9UIL4 384 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 MGAT4AQ9UM21 535 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 RELNP78509 3460 aa7.25□□□□□ -1.25
TDP1-203ENST00000393454 TEX13DA0A0J9YY54 714 aaPredicted RBP7.24□□□□□ -1.25
TDP1-203ENST00000393454 DEFB108AA8MXU0 73 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 PPYP01298 95 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 CTSDP07339 412 aaPredicted RBP7.24□□□□□ -1.25
TDP1-203ENST00000393454 CD55P08174 381 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 ADH4P08319 380 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 KCNJ3P48549 501 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 EDDM3AQ14507 147 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 HERPUD1Q15011 391 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 ZNF672Q499Z4 452 aaPredicted RBP7.24□□□□□ -1.25
TDP1-203ENST00000393454 KIAA2026Q5HYC2 2103 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 FAM209AQ5JX71 171 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 SLC35E4Q6ICL7 350 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 TGIF2LYQ8IUE0 185 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 MUC15Q8N387 334 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 OR10J5Q8NHC4 309 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 LILRB1Q8NHL6 650 aaPredicted RBP7.24□□□□□ -1.25
TDP1-203ENST00000393454 PPP1R35Q8TAP8 253 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 MOB3AQ96BX8 217 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 CFAP46Q8IYW2 2715 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 IGKV1-6A0A0C4DH72 117 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 POM121CA8CG34 1229 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 FAM25EA8MYX2 175 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 HSPA12AO43301 675 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 SFT2D2O95562 160 aa7.24□□□□□ -1.25
TDP1-203ENST00000393454 DUS4LO95620 317 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms