RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CTSDP07339 412 aaPredicted RBP13.1□□□□□ -0.31
CCDC50-201ENST00000392455 FAM24BQ8N5W8 94 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 PTX4Q96A99 478 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 CXXC4Q9H2H0 198 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 A0A1W2PNR3 127 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 TMEM262E9PQX1 116 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 H7C1H1 209 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 HMGN4O00479 90 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 ROM1Q03395 351 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 PATE1Q8WXA2 126 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 MPC1Q9Y5U8 109 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 TRGV8A0A0C4DH27 118 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 SELENOTP62341 195 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 DPTQ07507 201 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 SFT2D2O95562 160 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 SLC26A1Q9H2B4 701 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 GHITMQ9H3K2 345 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 FREM3P0C091 2139 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 SRSF10O75494 262 aaKnown RBP13.1□□□□□ -0.31
CCDC50-201ENST00000392455 LEMD1Q68G75 181 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 ASTLQ6HA08 431 aaPredicted RBP13.1□□□□□ -0.31
CCDC50-201ENST00000392455 TEPPQ6URK8 271 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 UBE2FQ969M7 185 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 IL17BQ9UHF5 180 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 TNFSF15O95150 251 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 TRGC1P0CF51 173 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 PARD6GQ9BYG4 376 aaPredicted RBP13.1□□□□□ -0.31
CCDC50-201ENST00000392455 PHLDA3Q9Y5J5 127 aa13.1□□□□□ -0.31
CCDC50-201ENST00000392455 MPC2O95563 127 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 HIST1H1DP16402 221 aaKnown RBP13.09□□□□□ -0.31
CCDC50-201ENST00000392455 PHLDA1Q8WV24 401 aaPredicted RBP13.09□□□□□ -0.31
CCDC50-201ENST00000392455 PEF1Q9UBV8 284 aaKnown RBP13.09□□□□□ -0.31
CCDC50-201ENST00000392455 PDCD6O75340 191 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 OR2A4O95047 310 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 LPAR6P43657 344 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 ETFBKMTQ8IXQ9 262 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 DEFB123Q8N688 67 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 OR2A7Q96R45 310 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 IGLV3-10A0A075B6K4 115 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 C9orf170A2RU37 121 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 CKS2P33552 79 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 TDHQ8IZJ6 230 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 DHRS2Q13268 280 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 ZNF441Q8N8Z8 693 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 DDB2Q92466 427 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 MOGAT3Q86VF5 341 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 CACNA1BQ00975 2339 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 HEATR5AQ86XA9 2040 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 H3BP45 60 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 TCF21O43680 179 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 SRSF5Q13243 272 aaKnown RBP13.09□□□□□ -0.31
CCDC50-201ENST00000392455 TP53I13Q8NBR0 393 aaPredicted RBP13.09□□□□□ -0.31
CCDC50-201ENST00000392455 OR1L8Q8NGR8 309 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 FGF22Q9HCT0 170 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 PRDM7Q9NQW5 492 aa13.09□□□□□ -0.31
CCDC50-201ENST00000392455 A0A1W2PR48 441 aa13.08□□□□□ -0.31
CCDC50-201ENST00000392455 H3BRM9 83 aa13.08□□□□□ -0.31
CCDC50-201ENST00000392455 CSN3P07498 182 aa13.08□□□□□ -0.31
CCDC50-201ENST00000392455 TRA2AQ13595 282 aaKnown RBP eCLIP13.08□□□□□ -0.31
CCDC50-201ENST00000392455 PPT2Q9UMR5 302 aa13.08□□□□□ -0.31
CCDC50-201ENST00000392455 POM121BA6NF01 834 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 FOLR2P14207 255 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 VDAC1P21796 283 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 ISL1P61371 349 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 TNFAIP6P98066 277 aaPredicted RBP13.08□□□□□ -0.32
CCDC50-201ENST00000392455 OTOSQ8NHW6 89 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 SPACA9Q96E40 222 aaPredicted RBP13.08□□□□□ -0.32
CCDC50-201ENST00000392455 POM121Q96HA1 1249 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 LPAR5Q9H1C0 372 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 IL11RAQ14626 422 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 PRO1933Q9H354 126 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 C20orf141Q9NUB4 165 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 UBE2V2Q15819 145 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 NCKAP5O14513 1909 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 PKD1L3Q7Z443 1732 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 CTXND1A0A1B0GTU2 59 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 GZMHP20718 246 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 KISS1Q15726 138 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 SSC5DA1L4H1 1573 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 CXorf65A6NEN9 183 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 SNURFLB1AK76 121 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 C1QTNF9BB2RNN3 333 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 SMIM13P0DJ93 91 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 FAM209AQ5JX71 171 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 AFMIDQ63HM1 303 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 ZNF841Q6ZN19 808 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 MRGPRX1Q96LB2 322 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 ABCA4P78363 2273 aa13.08□□□□□ -0.32
CCDC50-201ENST00000392455 B4GALT3O60512 393 aa13.07□□□□□ -0.32
CCDC50-201ENST00000392455 PMELP40967 661 aa13.07□□□□□ -0.32
CCDC50-201ENST00000392455 PYCARD-AS1I3L0S3 204 aa13.07□□□□□ -0.32
CCDC50-201ENST00000392455 HLA-DRB1P01911 266 aa13.07□□□□□ -0.32
CCDC50-201ENST00000392455 MMP9P14780 707 aa13.07□□□□□ -0.32
CCDC50-201ENST00000392455 PSG5Q15238 335 aa13.07□□□□□ -0.32
CCDC50-201ENST00000392455 TM4SF20Q53R12 229 aa13.07□□□□□ -0.32
CCDC50-201ENST00000392455 LPAR2Q9HBW0 351 aa13.07□□□□□ -0.32
CCDC50-201ENST00000392455 LOXL2Q9Y4K0 774 aa13.07□□□□□ -0.32
CCDC50-201ENST00000392455 DDX60LQ5H9U9 1706 aaKnown RBP13.07□□□□□ -0.32
CCDC50-201ENST00000392455 TRGV5A0A0B4J1U4 118 aa13.07□□□□□ -0.32
CCDC50-201ENST00000392455 MDP1Q86V88 176 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms