RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 RAB1BQ9H0U4 201 aa1.78□□□□□ -2.12
SNORA40.2-201ENST00000390847 TUBA4BQ9H853 241 aa1.78□□□□□ -2.12
SNORA40.2-201ENST00000390847 IFT46Q9NQC8 304 aa1.78□□□□□ -2.12
SNORA40.2-201ENST00000390847 PHLDA3Q9Y5J5 127 aa1.78□□□□□ -2.12
SNORA40.2-201ENST00000390847 TRAV8-2A0A0B4J237 113 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 FAM183AA6NL82 134 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 J3QKU1 62 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 SHOX2O60902 331 aaPredicted RBP1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 CRABP1P29762 137 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 TSPOP30536 169 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 RHOAP61586 193 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 MMDQ15546 238 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 C10orf91Q5T1B1 145 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 LAMTOR1Q6IAA8 161 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 NIT1Q86X76 327 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 ST13P4Q8IZP2 240 aaPredicted RBP1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 SLC25A45Q8N413 288 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 OR2V1Q8NHB1 315 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 SPPL2BQ8TCT7 592 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 PDCD6IPQ8WUM4 868 aaKnown RBP1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 KLF6Q99612 283 aaPredicted RBP1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 TAPBPLQ9BX59 468 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 FBXL15Q9H469 300 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 RPUSD1Q9UJJ7 312 aaKnown RBP1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 NXT1Q9UKK6 140 aaKnown RBP1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 ZNF337Q9Y3M9 751 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 USH1CQ9Y6N9 552 aa1.77□□□□□ -2.13
SNORA40.2-201ENST00000390847 ATRNO75882 1429 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 RNASEK-C17orf49H0YIS7 233 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 PSMD11O00231 422 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 HSPA13P48723 471 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 PSG4Q00888 419 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 C18orf21Q32NC0 220 aaPredicted RBP1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 Q6ZT83 130 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 CLEC20AQ6ZU45 233 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 SCXQ7RTU7 201 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 KRTCAP2Q8N6L1 136 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 Q8NDZ9 215 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 OR5C1Q8NGR4 320 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 KCTD4Q8WVF5 259 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 MSANTD3Q96H12 275 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 PGLYRP3Q96LB9 341 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 B9D2Q9BPU9 175 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 SIKE1Q9BRV8 207 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 GOLPH3Q9H4A6 298 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 VPREB3Q9UKI3 123 aa1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 TBL2Q9Y4P3 447 aaKnown RBP1.76□□□□□ -2.13
SNORA40.2-201ENST00000390847 NUP205Q92621 2012 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 F5H5T6 163 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 PLPP3O14495 311 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 CDIPTO14735 213 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 LECT2O14960 151 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 FABP7O15540 132 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 SLC25A20O43772 301 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 MAGEA3P43357 314 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 RAB2AP61019 212 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 APOFQ13790 326 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 FAM183BPQ6ZVS7 135 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 SSX7Q7RTT5 188 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 ZNF567Q8N184 647 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 CDRT4Q8N9R6 151 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 OR5P2Q8WZ92 322 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 FAAP24Q9BTP7 215 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 POTEKPQ9BYX7 375 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 TAS2R13Q9NYV9 303 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 TAS2R9Q9NYW1 312 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 LINC00588Q9Y4M8 146 aa1.75□□□□□ -2.13
SNORA40.2-201ENST00000390847 TRGV4A0A0C4DH28 118 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 OVOL1O14753 267 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 FGF16O43320 207 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 S100A9P06702 114 aaKnown RBP1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 IFI30P13284 250 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 AKR1C4P17516 323 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 COILP38432 576 aaPredicted RBP1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 AQP5P55064 265 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 MP68P56378 58 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 CD164Q04900 197 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 TSPAN31Q12999 210 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 BSXQ3C1V8 233 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 SPIN4Q56A73 249 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 AHSA2Q719I0 299 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 TCF23Q7RTU1 214 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 FAM19A3Q7Z5A8 133 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 TMEM239Q8WW34 195 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 NAP1L5Q96NT1 182 aaPredicted RBP1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 HAUS4Q9H6D7 363 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 METTL8Q9H825 291 aaKnown RBP1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 HSPE1-MOB4S4R3N1 261 aa1.74□□□□□ -2.13
SNORA40.2-201ENST00000390847 C17orf98A8MV24 154 aa1.73□□□□□ -2.13
SNORA40.2-201ENST00000390847 TMEM250H0YL14 139 aa1.73□□□□□ -2.13
SNORA40.2-201ENST00000390847 TOR1AO14656 332 aa1.73□□□□□ -2.13
SNORA40.2-201ENST00000390847 ACBD4Q8NC06 268 aa1.73□□□□□ -2.13
SNORA40.2-201ENST00000390847 DTD1Q8TEA8 209 aa1.73□□□□□ -2.13
SNORA40.2-201ENST00000390847 EBPLQ9BY08 206 aa1.73□□□□□ -2.13
SNORA40.2-201ENST00000390847 ALX4Q9H161 411 aaPredicted RBP1.73□□□□□ -2.13
SNORA40.2-201ENST00000390847 TMEM106BQ9NUM4 274 aa1.73□□□□□ -2.13
SNORA40.2-201ENST00000390847 STK38LQ9Y2H1 464 aa1.73□□□□□ -2.13
SNORA40.2-201ENST00000390847 SOX14O95416 240 aa1.72□□□□□ -2.13
SNORA40.2-201ENST00000390847 IGKV1-16P04430 117 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms