RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 DUS4LO95620 317 aaKnown RBP11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 CRYZL1O95825 349 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 PRRX1P54821 245 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 COL10A1Q03692 680 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 SPINK9Q5DT21 86 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 PHYHD1Q5SRE7 291 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 GAPTQ8N292 157 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 RNF115Q9Y4L5 304 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 U3KQA8 63 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 IGLV3-32A0A0A0MS00 114 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 A0A1W2PPE3 182 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 GYPAP02724 150 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 H2AFB1P0C5Y9 115 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 CHATP28329 748 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 GPR6P46095 362 aaPredicted RBP11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 RAB32Q13637 225 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 DUSP18Q8NEJ0 188 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 FAM57AQ8TBR7 257 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 SCARB1Q8WTV0 552 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 POM121L2Q96KW2 1035 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 NEURL2Q9BR09 285 aa11.32□□□□□ -0.6
PTPRN2-202ENST00000389416 RPL36A-HNRNPH2H7BZ11 118 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 CEBPDP49716 269 aaPredicted RBP11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 FGF12P61328 243 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 BAP18Q8IXM2 172 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 GPR137Q96N19 417 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 RASL12Q9NYN1 266 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 PHF3Q92576 2039 aaKnown RBP11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 CECR9P0C854 216 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 FAM74A1Q5RGS3 127 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 AVPI1Q5T686 147 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 IL34Q6ZMJ4 242 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 ASCL5Q7RTU5 278 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 LILRB4Q8NHJ6 448 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 ACY3Q96HD9 319 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 NPTNQ9Y639 398 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 OTOGLQ3ZCN5 2332 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 TAAR5O14804 337 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 CA11O75493 328 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 IFITM3Q01628 133 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 SOHLH1Q5JUK2 328 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 C1orf100Q5SVJ3 147 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 C11orf87Q6NUJ2 197 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 TBC1D26Q86UD7 250 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 NANPQ8TBE9 248 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 RNF122Q9H9V4 155 aa11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 MRPS18CQ9Y3D5 142 aaKnown RBP11.31□□□□□ -0.6
PTPRN2-202ENST00000389416 HPXP02790 462 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 CTSDP07339 412 aaPredicted RBP11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 M6PRP20645 277 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 PPP1CCP36873 323 aaKnown RBP11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 ERVS71-1P61550 626 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 HLA-DRB3P79483 266 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 NAAAQ02083 359 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 CLEC18BQ6UXF7 455 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 UNQ9370/PRO34162Q6UXP9 181 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 OR4D10Q8NGI6 311 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 PTX4Q96A99 478 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 SLC25A38Q96DW6 304 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 MRPL13Q9BYD1 178 aaKnown RBP11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 SLC35D1Q9NTN3 355 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 SLC25A10Q9UBX3 287 aaPredicted RBP11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 A8MXE2 369 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 PRSS44E7EML9 344 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 CLPSP04118 112 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 PRF1P14222 555 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 TIMM23BQ5SRD1 257 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 FDX2Q6P4F2 183 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 UHRF2Q96PU4 802 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 SLC2A9Q9NRM0 540 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 ADH4P08319 380 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 TMEM11P17152 192 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 KLF9Q13886 244 aaPredicted RBP11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 FRZBQ92765 325 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 GNPNAT1Q96EK6 184 aaPredicted RBP11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 RAB18Q9NP72 206 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 SHISA3A0PJX4 238 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 NPBWR2P48146 333 aa11.3□□□□□ -0.6
PTPRN2-202ENST00000389416 CLDN14O95500 239 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 CPN1P15169 458 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 IGHV1-2P23083 117 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 S100A7P31151 101 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 SPRR3Q9UBC9 169 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 NCOR2Q9Y618 2525 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 OR2H2O95918 312 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 FCGR3AP08637 254 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 CEACAM3P40198 252 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 COL25A1Q9BXS0 654 aaPredicted RBP11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 CD300CQ08708 224 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 HOGA1Q86XE5 327 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 LHX4Q969G2 390 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 DAZAP1Q96EP5 407 aaKnown RBP11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 TMEM123Q8N131 208 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 TNFRSF19Q9NS68 423 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 ELF5Q9UKW6 265 aaPredicted RBP11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 OR2W1Q9Y3N9 320 aa11.29□□□□□ -0.6
PTPRN2-202ENST00000389416 MYLKQ15746 1914 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 MGST3O14880 152 aa11.28□□□□□ -0.6
PTPRN2-202ENST00000389416 UBE2KP61086 200 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms