RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 TFPI2P48307 235 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 TNFSF10P50591 281 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 CNN1P51911 297 aaKnown RBP12.93□□□□□ -0.34
CTNS-202ENST00000381870 UCP3P55916 312 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 ID3Q02535 119 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 OR5I1Q13606 314 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 CYP2G1PQ6ZSU1 146 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 SPIN2AQ99865 258 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 SPIN2BQ9BPZ2 258 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 WWTR1Q9GZV5 400 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 OR6C3Q9NZP0 311 aa12.93□□□□□ -0.34
CTNS-202ENST00000381870 LIPT2A6NK58 231 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 OR2J2O76002 312 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 PPYP01298 95 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 GNRHRP30968 328 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 HHEXQ03014 270 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 IL24Q13007 206 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 ACOT6Q3I5F7 207 aaPredicted RBP12.92□□□□□ -0.34
CTNS-202ENST00000381870 PIGYQ3MUY2 71 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 CALHM1Q8IU99 346 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 MBD3L1Q8WWY6 194 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 ZNF845Q96IR2 970 aaPredicted RBP12.92□□□□□ -0.34
CTNS-202ENST00000381870 TMEM56Q96MV1 263 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 MS4A10Q96PG2 267 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 TMEM56-RWDD3S4R434 201 aa12.92□□□□□ -0.34
CTNS-202ENST00000381870 TMEM150CB9EJG8 249 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 SIAH2O43255 324 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 CNOT4O95628 575 aaKnown RBP12.91□□□□□ -0.34
CTNS-202ENST00000381870 IFNA5P01569 189 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 IGLV3-1P01715 115 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 HNRNPA2B1P22626 353 aaKnown RBP12.91□□□□□ -0.34
CTNS-202ENST00000381870 PRSS12P56730 875 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 SPIN3Q5JUX0 258 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 CENPVQ7Z7K6 275 aaPredicted RBP12.91□□□□□ -0.34
CTNS-202ENST00000381870 TMEM234Q8WY98 164 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 ZNF160Q9HCG1 818 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 LTBP2Q14767 1821 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 IL6RP08887 468 aaPredicted RBP12.91□□□□□ -0.34
CTNS-202ENST00000381870 SRPXP78539 464 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 C1orf61Q13536 156 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 CST9LP1Q5W188 147 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 MRGPRGQ86SM5 289 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 OR2T10Q8NGZ9 312 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 IL22RA2Q969J5 263 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 FAM131CQ96AQ9 280 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 OR2J1Q9GZK6 312 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 ZNF286AQ9HBT8 521 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 PARD6AQ9NPB6 346 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 RNF115Q9Y4L5 304 aa12.91□□□□□ -0.34
CTNS-202ENST00000381870 LILRA1O75019 489 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 ZNF737O75373 536 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 IGHG1P01857 330 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 COL9A1P20849 921 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 GRB2P62993 217 aaKnown RBP12.9□□□□□ -0.34
CTNS-202ENST00000381870 NMSQ5H8A3 153 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 SLC25A47Q6Q0C1 308 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 NEK7Q8TDX7 302 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 PP6455Q8WZ26 134 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 IGKV1-27A0A075B6S5 117 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 KBTBD11O94819 623 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 ZNF41P51814 821 aaPredicted RBP12.9□□□□□ -0.34
CTNS-202ENST00000381870 RPP30P78346 268 aaKnown RBP12.9□□□□□ -0.34
CTNS-202ENST00000381870 ZNF92Q03936 586 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 EIF3IQ13347 325 aaKnown RBP12.9□□□□□ -0.34
CTNS-202ENST00000381870 TOMM20LQ6UXN7 152 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 ZNF295-AS1Q8N0V1 137 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 POC1BQ8TC44 478 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 RASL10BQ96S79 203 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 MIEN1Q9BRT3 115 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 AGMATQ9BSE5 352 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 WNT5BQ9H1J7 359 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 OR51I2Q9H344 312 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 TAAR3PQ9P1P4 343 aa12.9□□□□□ -0.34
CTNS-202ENST00000381870 SEC16AO15027 2179 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 TNFRSF10CO14798 259 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 EFNA2O43921 213 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 CD82P27701 267 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 MYBPHQ13203 477 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 TMEM196Q5HYL7 178 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 Q6ZSR6 202 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 RTL10Q7L3V2 364 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 SPPL3Q8TCT6 385 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 ZCCHC14Q8WYQ9 949 aaKnown RBP12.89□□□□□ -0.35
CTNS-202ENST00000381870 DDIT4LQ96D03 193 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 IL23AQ9NPF7 189 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 ALKBH4Q9NXW9 302 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 MAP1LC3B2A6NCE7 125 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 ZNF814B7Z6K7 855 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 GCH1P30793 250 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 KIR2DL1P43626 348 aaPredicted RBP12.89□□□□□ -0.35
CTNS-202ENST00000381870 NPBWR2P48146 333 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 TMEM240Q5SV17 173 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 C9orf50Q5SZB4 431 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 FBXW9Q5XUX1 488 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 ZNF818PQ6ZRF7 136 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 CISD2Q8N5K1 135 aaKnown RBP12.89□□□□□ -0.35
CTNS-202ENST00000381870 ABHD14BQ96IU4 210 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 PLA2G2FQ9BZM2 168 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 MAP1LC3BQ9GZQ8 125 aa12.89□□□□□ -0.35
CTNS-202ENST00000381870 GPR35Q9HC97 309 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 181.9 ms