RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 IL22RA1Q8N6P7 574 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 OR1P1Q8NH06 330 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 YPEL4Q96NS1 127 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 SNHG12Q9BXW3 62 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 PLEKHF2Q9H8W4 249 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 P4HTMQ9NXG6 502 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 IGHV5-10-1A0A0J9YXX1 117 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 PTGDSP41222 190 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 ZNF41P51814 821 aaPredicted RBP11.98□□□□□ -0.49
SDC1-202ENST00000381150 SUCLG1P53597 346 aaKnown RBP11.98□□□□□ -0.49
SDC1-202ENST00000381150 BTNL3Q6UXE8 466 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 CLDND2Q8NHS1 167 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 SAP25Q8TEE9 199 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 VSIRQ9H7M9 311 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 TP53TG5Q9Y2B4 290 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 C3orf85A0A1B0GTC6 90 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 A0A1B0GUS0 222 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 PATE4P0C8F1 98 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 IL22RA2Q969J5 263 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 ELOVL1Q9BW60 279 aa11.98□□□□□ -0.49
SDC1-202ENST00000381150 PROB1E7EW31 1015 aa11.97□□□□□ -0.49
SDC1-202ENST00000381150 TMEM183AQ8IXX5 376 aa11.97□□□□□ -0.49
SDC1-202ENST00000381150 PRR18Q8N4B5 295 aa11.97□□□□□ -0.49
SDC1-202ENST00000381150 RHBDD1Q8TEB9 315 aa11.97□□□□□ -0.49
SDC1-202ENST00000381150 METTL9Q9H1A3 318 aa11.97□□□□□ -0.49
SDC1-202ENST00000381150 DOCK7Q96N67 2140 aa11.97□□□□□ -0.49
SDC1-202ENST00000381150 H7BYZ3 331 aa11.97□□□□□ -0.49
SDC1-202ENST00000381150 SCRG1O75711 98 aa11.97□□□□□ -0.49
SDC1-202ENST00000381150 HSPB1P04792 205 aaKnown RBP11.97□□□□□ -0.49
SDC1-202ENST00000381150 BTF3P20290 206 aaKnown RBP11.97□□□□□ -0.49
SDC1-202ENST00000381150 GPR137CQ8N3F9 429 aa11.97□□□□□ -0.49
SDC1-202ENST00000381150 SNIP1Q8TAD8 396 aaKnown RBP11.97□□□□□ -0.49
SDC1-202ENST00000381150 BORCS8Q96FH0 119 aa11.97□□□□□ -0.49
SDC1-202ENST00000381150 NEU1Q99519 415 aa11.97□□□□□ -0.49
SDC1-202ENST00000381150 AKIRIN1Q9H9L7 192 aaPredicted RBP11.97□□□□□ -0.49
SDC1-202ENST00000381150 NPIPB13A6NJU9 1138 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 NPIPB4C9JG80 1138 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 M0R143 59 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 LCATP04180 440 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 SUMO3P55854 103 aaPredicted RBP11.96□□□□□ -0.49
SDC1-202ENST00000381150 PRAMEF20Q5VT98 475 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 C16orf82Q7Z2V1 217 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 SLC35E3Q7Z769 313 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 DTX1Q86Y01 620 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 CCDC71LQ8N9Z2 235 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 ARV1Q9H2C2 271 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 METTL7AQ9H8H3 244 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 FSCN3Q9NQT6 498 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 RPRMQ9NS64 109 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 ST3GAL6Q9Y274 331 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 RBM7Q9Y580 266 aaKnown RBP11.96□□□□□ -0.49
SDC1-202ENST00000381150 TRIOBPQ9H2D6 2365 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 DKK1O94907 266 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 METTL15P1P0C7V9 234 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 THEM4Q5T1C6 240 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 UBALD1Q8TB05 177 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 ZNF286AQ9HBT8 521 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 SIT1Q9Y3P8 196 aa11.96□□□□□ -0.49
SDC1-202ENST00000381150 RP1L1Q8IWN7 2480 aaPredicted RBP11.96□□□□□ -0.5
SDC1-202ENST00000381150 TRBV11-1A0A0K0K1C0 115 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 ZNF814B7Z6K7 855 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 TGOLN2O43493 480 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 HBE1P02100 147 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 CHRNA7P36544 502 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 FAM3BP58499 235 aaPredicted RBP11.96□□□□□ -0.5
SDC1-202ENST00000381150 SLC25A53Q5H9E4 307 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 TBC1D26Q86UD7 250 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 POC1BQ8TC44 478 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 MSI2Q96DH6 328 aaKnown RBP11.96□□□□□ -0.5
SDC1-202ENST00000381150 RBMXL1Q96E39 390 aaKnown RBP11.96□□□□□ -0.5
SDC1-202ENST00000381150 SDSLQ96GA7 329 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 LYZL4Q96KX0 146 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 DUSP23Q9BVJ7 150 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 MSL2Q9HCI7 577 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 GOLT1BQ9Y3E0 138 aa11.96□□□□□ -0.5
SDC1-202ENST00000381150 A0A087WWC5 75 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 IGLV3-32A0A0A0MS00 114 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 CYB5R3P00387 301 aaPredicted RBP11.95□□□□□ -0.5
SDC1-202ENST00000381150 CCNOP22674 350 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 GALR1P47211 349 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 UCP2P55851 309 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 CALHM1Q8IU99 346 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 GNPNAT1Q96EK6 184 aaPredicted RBP11.95□□□□□ -0.5
SDC1-202ENST00000381150 RALGAPA1Q6GYQ0 2036 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 LIPT2A6NK58 231 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 G3V3Y1 287 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 NPSP0C0P6 89 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 ECI1P42126 302 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 TEX38Q6PEX7 206 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 OR1K1Q8NGR3 316 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 PIGCQ92535 297 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 NOL4LQ96MY1 436 aaPredicted RBP11.95□□□□□ -0.5
SDC1-202ENST00000381150 B3GAT1Q9P2W7 334 aa11.95□□□□□ -0.5
SDC1-202ENST00000381150 MPPED1O15442 326 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 TMEM50AO95807 157 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 HNF1AP20823 631 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 ZNF506Q5JVG8 444 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 OR8G2PQ6IF36 304 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 SLC16A14Q7RTX9 510 aa11.94□□□□□ -0.5
SDC1-202ENST00000381150 NOXO1Q8NFA2 376 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms