RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 YIF1AO95070 293 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 OR2C1O95371 312 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 CYC1P08574 325 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 EDN3P14138 238 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 TMEM42Q69YG0 159 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 SPSB3Q6PJ21 355 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 ASCL4Q6XD76 172 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 ODF3L1Q8IXM7 274 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 EDARADDQ8WWZ3 215 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 WNT5BQ9H1J7 359 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 DEFB127Q9H1M4 99 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 LIPGQ9Y5X9 500 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 OR6C6A6NF89 314 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 PROB1E7EW31 1015 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 ADAM20O43506 726 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 PBDC1Q9BVG4 233 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 C11orf1Q9H5F2 150 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 C12orf49Q9H741 205 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 GPR35Q9HC97 309 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 BOKQ9UMX3 212 aaPredicted RBP13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 SLC7A11Q9UPY5 501 aa13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 STRAPQ9Y3F4 350 aaKnown RBP13.96□□□□□ -0.17
NKX3-1-201ENST00000380871 IGKV1D-13A0A0B4J2D9 117 aa13.96□□□□□ -0.18
NKX3-1-201ENST00000380871 SCTP09683 121 aa13.96□□□□□ -0.18
NKX3-1-201ENST00000380871 IGKV1-13P0DP09 117 aa13.96□□□□□ -0.18
NKX3-1-201ENST00000380871 ARF1P84077 181 aaKnown RBP13.96□□□□□ -0.18
NKX3-1-201ENST00000380871 RHEBQ15382 184 aa13.96□□□□□ -0.18
NKX3-1-201ENST00000380871 ZNF818PQ6ZRF7 136 aa13.96□□□□□ -0.18
NKX3-1-201ENST00000380871 OR5C1Q8NGR4 320 aa13.96□□□□□ -0.18
NKX3-1-201ENST00000380871 KCNE4Q8WWG9 221 aa13.96□□□□□ -0.18
NKX3-1-201ENST00000380871 UBE2J1Q9Y385 318 aaPredicted RBP13.96□□□□□ -0.18
NKX3-1-201ENST00000380871 TMED3Q9Y3Q3 217 aa13.96□□□□□ -0.18
NKX3-1-201ENST00000380871 MT-CO3P00414 261 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 NKX2-1P43699 371 aaPredicted RBP13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 RND3P61587 244 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 TMPRSS7Q7RTY8 843 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 OR2M7Q8NG81 312 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 TMEM222Q9H0R3 208 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 P4HA3Q7Z4N8 544 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 GAPTQ8N292 157 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 RIF1Q5UIP0 2472 aaKnown RBP13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 GVINP1Q7Z2Y8 2422 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 IGHV3-64DA0A0J9YX35 117 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 TRDCB7Z8K6 153 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 HSD17B6O14756 317 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 NEURL1O76050 574 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 CD59P13987 128 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 RPS10P46783 165 aaKnown RBP13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 FOXO1Q12778 655 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 TSC22D1Q15714 1073 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 ZNF695Q8IW36 515 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 YPEL4Q96NS1 127 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 OR2H1Q9GZK4 316 aa13.95□□□□□ -0.18
NKX3-1-201ENST00000380871 RP1L1Q8IWN7 2480 aaPredicted RBP13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 RBFOX3A6NFN3 312 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 H3BP45 60 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 H3BQ15 152 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 AP4M1O00189 453 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 PPIHO43447 177 aaKnown RBP13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 CST2P09228 141 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 RAB5CP51148 216 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 DYNLT3P51808 116 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 IGFBP7Q16270 282 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 DCAF10Q5QP82 559 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 HES3Q5TGS1 186 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 CDPF1Q6NVV7 123 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 TMEM252Q8N6L7 170 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 EXTL1Q92935 676 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 RAB39BQ96DA2 213 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 PAPOLGQ9BWT3 736 aaKnown RBP13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 BCL2L14Q9BZR8 327 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 CDX4O14627 284 aaPredicted RBP13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 BCL3P20749 454 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 FUT3P21217 361 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 HERPUD1Q15011 391 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 IZUMO4Q1ZYL8 232 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 HEPN1Q6WQI6 88 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 CCDC71LQ8N9Z2 235 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 CPEB3Q8NE35 698 aaKnown RBP13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 SF3B5Q9BWJ5 86 aaKnown RBP13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 FGF23Q9GZV9 251 aaPredicted RBP13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 CACNA1GO43497 2377 aa13.94□□□□□ -0.18
NKX3-1-201ENST00000380871 FUT6P51993 359 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 ZNF154Q13106 437 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 CYB561D1Q8N8Q1 229 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 INTS12Q96CB8 462 aaKnown RBP13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 PARPBPQ9NWS1 579 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 ARGFXA6NJG6 315 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 IFITM10A6NMD0 228 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 DPPA2Q7Z7J5 298 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 SELENOHQ8IZQ5 122 aaKnown RBP13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 CPT1CQ8TCG5 803 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 CXCL1P09341 107 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 PMELP40967 661 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 UCP3P55916 312 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 MUCL1Q96DR8 90 aa13.93□□□□□ -0.18
NKX3-1-201ENST00000380871 C5orf49A4QMS7 147 aa13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 SYNGR4O95473 234 aa13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 MCEMP1Q8IX19 187 aa13.92□□□□□ -0.18
NKX3-1-201ENST00000380871 CCL28Q9NRJ3 127 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms