RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 RPEQ96AT9 228 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 SYT11Q9BT88 431 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 PLEKHB1Q9UF11 243 aaPredicted RBP9.56□□□□□ -0.88
CLCN4-202ENST00000380833 H7C2G1 150 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 GDF9O60383 454 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 CFDP00746 253 aaPredicted RBP9.56□□□□□ -0.88
CLCN4-202ENST00000380833 RNASE1P07998 156 aaKnown RBP9.56□□□□□ -0.88
CLCN4-202ENST00000380833 OPRK1P41145 380 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 PAX2Q02962 417 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 SPINK14Q6IE38 97 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 WNT2BQ93097 391 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 RAB40CQ96S21 281 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 TMEM38AQ9H6F2 299 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 NAA60Q9H7X0 242 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 IGHV3-21A0A0B4J1V1 117 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 MBLAC1A4D2B0 266 aaPredicted RBP9.56□□□□□ -0.88
CLCN4-202ENST00000380833 SBK3P0C264 359 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 COX5BP10606 129 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 FGF5P12034 268 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 GLIPR1P48060 266 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 SLC48A1Q6P1K1 146 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 ASCC3Q8N3C0 2202 aaKnown RBP9.56□□□□□ -0.88
CLCN4-202ENST00000380833 SPEF2Q9C093 1822 aa9.56□□□□□ -0.88
CLCN4-202ENST00000380833 TRAV30A0A087WSZ9 112 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 TRAV39A0A0B4J263 110 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 LOC107986453A0A1B0GWG9 222 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 FZD5Q13467 585 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 MESTQ5EB52 335 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 RSPO2Q6UXX9 243 aaPredicted RBP9.55□□□□□ -0.88
CLCN4-202ENST00000380833 OR6X1Q8NH79 312 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 RPP25Q9BUL9 199 aaKnown RBP9.55□□□□□ -0.88
CLCN4-202ENST00000380833 ZNF257Q9Y2Q1 563 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 PLPP1O14494 284 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 LEPROTL1O95214 131 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 RIGQ13278 110 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 CDK5R1Q15078 307 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 SLCO4C1Q6ZQN7 724 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 ZDHHC23Q8IYP9 409 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 ATOH7Q8N100 152 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 OLIG1Q8TAK6 271 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 MRPL18Q9H0U6 180 aaKnown RBP9.55□□□□□ -0.88
CLCN4-202ENST00000380833 TECRQ9NZ01 308 aaKnown RBP9.55□□□□□ -0.88
CLCN4-202ENST00000380833 UFC1Q9Y3C8 167 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 K7EQS6 105 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 HSPB1P04792 205 aaKnown RBP9.55□□□□□ -0.88
CLCN4-202ENST00000380833 RCC1P18754 421 aaPredicted RBP9.55□□□□□ -0.88
CLCN4-202ENST00000380833 CYB561D1Q8N8Q1 229 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 CDX2Q99626 313 aaPredicted RBP9.55□□□□□ -0.88
CLCN4-202ENST00000380833 VN1R1Q9GZP7 353 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 SLC25A19Q9HC21 320 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 NTN1O95631 604 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 HLA-GP17693 338 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 TEAD1P28347 426 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 ABHD17CQ6PCB6 329 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 BHLHA15Q7RTS1 189 aaPredicted RBP9.55□□□□□ -0.88
CLCN4-202ENST00000380833 UBALD2Q8IYN6 164 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 OR8G5Q8NG78 346 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 SLC7A10Q9NS82 523 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 KCNE5Q9UJ90 142 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 F11RQ9Y624 299 aaKnown RBP9.55□□□□□ -0.88
CLCN4-202ENST00000380833 TYMSP04818 313 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 PATE4P0C8F1 98 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 MMP9P14780 707 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 TMEM70Q9BUB7 260 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 KIR3DX1Q9H7L2 352 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 IGKV6D-21A0A0A0MT36 114 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 ORM1P02763 201 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 CA6P23280 308 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 SOX8P57073 446 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 LYG1Q8N1E2 194 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 OR52N4Q8NGI2 321 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 DERL3Q96Q80 235 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 TAAR3PQ9P1P4 343 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 CLN8Q9UBY8 286 aa9.55□□□□□ -0.88
CLCN4-202ENST00000380833 HSPB2A8KAH6 182 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 PFN3P60673 137 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 UBE2L3P68036 154 aaKnown RBP9.54□□□□□ -0.88
CLCN4-202ENST00000380833 SLC35B1P78383 322 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 SLC38A11Q08AI6 406 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 FOXF1Q12946 379 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 HSPB2Q16082 182 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 DLEU7Q6UYE1 221 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 SGMS2Q8NHU3 365 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 LAT2Q9GZY6 243 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 MRPL16Q9NX20 251 aaKnown RBP9.54□□□□□ -0.88
CLCN4-202ENST00000380833 CHD4Q14839 1912 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 APOBEC1P41238 236 aaKnown RBP9.54□□□□□ -0.88
CLCN4-202ENST00000380833 CEACAM16Q2WEN9 425 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 LRRC29Q8WV35 223 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 MS4A6EQ96DS6 147 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 PHRF1Q9P1Y6 1649 aaKnown RBP9.54□□□□□ -0.88
CLCN4-202ENST00000380833 TRAV8-4A0A0B4J246 113 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 ERGP11308 486 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 FAM219BQ5XKK7 198 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 ZNF774Q6NX45 483 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 C1orf210Q8IVY1 113 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 DYNLRB2Q8TF09 96 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 WDR34Q96EX3 536 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 KNDC1Q76NI1 1749 aa9.54□□□□□ -0.88
CLCN4-202ENST00000380833 TOPAZ1Q8N9V7 1692 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms