RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 ADAT3Q96EY9 351 aaPredicted RBP13.36□□□□□ -0.27
HMGN1-203ENST00000380748 OR51J1Q9H342 316 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 GHITMQ9H3K2 345 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 KRT84Q9NSB2 600 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 TVP23BQ9NYZ1 205 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 ACTR3BQ9P1U1 418 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 KIAA1456Q9P272 454 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 ZNF580Q9UK33 172 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 KIAA1109Q2LD37 5005 aa13.36□□□□□ -0.27
HMGN1-203ENST00000380748 LOC107986453A0A1B0GWG9 222 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 NPIPB11E5RHQ5 1161 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 ZNF670-ZNF695F2Z2N8 137 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 DEGS1O15121 323 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 OR8U9P0C7N5 309 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 C21orf33P30042 268 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-203ENST00000380748 CDK5R1Q15078 307 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 YIPF7Q8N8F6 280 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 SPACA5Q96QH8 159 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 ADI1Q9BV57 179 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 ADGRL4Q9HBW9 690 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 SLC25A19Q9HC21 320 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 RETNQ9HD89 108 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 ZNF107Q9UII5 783 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-203ENST00000380748 KMT2AQ03164 3969 aa13.35□□□□□ -0.27
HMGN1-203ENST00000380748 TRAV39A0A0B4J263 110 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 LINC01619G3V211 115 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 IGLV1-40P01703 118 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 SLC2A2P11168 524 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-203ENST00000380748 ATF1P18846 271 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 PRKACBP22694 351 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 CD1BP29016 333 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 MTNR1BP49286 362 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 HS3ST5Q8IZT8 346 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 RDH10Q8IZV5 341 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 IL17DQ8TAD2 202 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 LINC00476Q8WZB0 136 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 EME1Q96AY2 570 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 C10orf35Q96D05 121 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 CLN6Q9NWW5 311 aa13.34□□□□□ -0.27
HMGN1-203ENST00000380748 HECTD4Q9Y4D8 3996 aa13.33□□□□□ -0.27
HMGN1-203ENST00000380748 IGHV4OR15-8A0A075B7B6 117 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 A0A087WW49 117 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 HSPA12AO43301 675 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 KRT8P05787 483 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 ARSBP15848 533 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 RAB9AP51151 201 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 FAM98BQ52LJ0 330 aaKnown RBP13.33□□□□□ -0.28
HMGN1-203ENST00000380748 SLC16A12Q6ZSM3 486 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 DEFB107AQ8IZN7 70 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 PRSS35Q8N3Z0 413 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 CCDC54Q8NEL0 328 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 OR8H1Q8NGG4 311 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 RTN4IP1Q8WWV3 396 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-203ENST00000380748 OPALINQ96PE5 141 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 OR4C12Q96R67 309 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 MNTQ99583 582 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 TBX5Q99593 518 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 TEX12Q9BXU0 123 aa13.33□□□□□ -0.28
HMGN1-203ENST00000380748 FAM90A10PA6NDY2 464 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 H0YJX3 145 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 M0R129 80 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 ATP6V0E1O15342 81 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 PRKYO43930 277 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 PITPNAQ00169 270 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 GK3PQ14409 553 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 PAN3Q58A45 887 aaKnown RBP13.32□□□□□ -0.28
HMGN1-203ENST00000380748 RSBN1Q5VWQ0 802 aaPredicted RBP13.32□□□□□ -0.28
HMGN1-203ENST00000380748 OR10A7Q8NGE5 316 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 PLPPR1Q8TBJ4 325 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 FAM110AQ9BQ89 295 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 CHCHD6Q9BRQ6 235 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 TOLLIPQ9H0E2 274 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 NCOR1P1Q9H4R4 102 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 ZNF556Q9HAH1 456 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 NEK6Q9HC98 313 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 TPSG1Q9NRR2 321 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 CHCHD3Q9NX63 227 aaKnown RBP13.32□□□□□ -0.28
HMGN1-203ENST00000380748 DNAH10Q8IVF4 4471 aa13.32□□□□□ -0.28
HMGN1-203ENST00000380748 TRAV24A0A0B4J272 114 aa13.31□□□□□ -0.28
HMGN1-203ENST00000380748 CST1P01037 141 aa13.31□□□□□ -0.28
HMGN1-203ENST00000380748 PRKACGP22612 351 aa13.31□□□□□ -0.28
HMGN1-203ENST00000380748 KIR3DL2P43630 455 aa13.31□□□□□ -0.28
HMGN1-203ENST00000380748 UTS2BQ765I0 119 aa13.31□□□□□ -0.28
HMGN1-203ENST00000380748 DDB2Q92466 427 aa13.31□□□□□ -0.28
HMGN1-203ENST00000380748 SPSB1Q96BD6 273 aa13.31□□□□□ -0.28
HMGN1-203ENST00000380748 FGGYQ96C11 551 aa13.31□□□□□ -0.28
HMGN1-203ENST00000380748 PARP11Q9NR21 331 aa13.31□□□□□ -0.28
HMGN1-203ENST00000380748 IGLV1-51P01701 117 aa13.3□□□□□ -0.28
HMGN1-203ENST00000380748 GALEQ14376 348 aa13.3□□□□□ -0.28
HMGN1-203ENST00000380748 SPATS1Q496A3 300 aa13.3□□□□□ -0.28
HMGN1-203ENST00000380748 CASTOR1Q8WTX7 329 aa13.3□□□□□ -0.28
HMGN1-203ENST00000380748 ZCCHC4Q9H5U6 513 aa13.3□□□□□ -0.28
HMGN1-203ENST00000380748 RHOFQ9HBH0 211 aa13.3□□□□□ -0.28
HMGN1-203ENST00000380748 MYRFQ9Y2G1 1151 aa13.3□□□□□ -0.28
HMGN1-203ENST00000380748 TRAV41A0A0B4J266 112 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 METTL15A6NJ78 407 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 C12orf77C9JDV5 145 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 LY6G6CO95867 125 aa13.29□□□□□ -0.28
HMGN1-203ENST00000380748 LGALS1P09382 135 aaKnown RBP13.29□□□□□ -0.28
HMGN1-203ENST00000380748 OCM2P0CE71 109 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms