RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 TMPRSS3P57727 454 aa19.64■□□□□ 0.73
VPS16-201ENST00000380443 HLA-DRB3P79483 266 aa19.64■□□□□ 0.73
VPS16-201ENST00000380443 MZT1Q08AG7 82 aa19.64■□□□□ 0.73
VPS16-201ENST00000380443 TSC22D1Q15714 1073 aa19.64■□□□□ 0.73
VPS16-201ENST00000380443 WDR86Q86TI4 376 aa19.64■□□□□ 0.73
VPS16-201ENST00000380443 CABLES2Q9BTV7 478 aa19.64■□□□□ 0.73
VPS16-201ENST00000380443 PLEKHA2Q9HB19 425 aa19.64■□□□□ 0.73
VPS16-201ENST00000380443 PURGQ9UJV8 347 aaKnown RBP19.64■□□□□ 0.73
VPS16-201ENST00000380443 C3orf85A0A1B0GTC6 90 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 DUXBA0A1W2PPF3 345 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 OR5H1A6NKK0 313 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 NPIPB11E5RHQ5 1161 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 SH2D1BO14796 132 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 DEDDO75618 318 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 ZNF44P15621 663 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 S100GP29377 79 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 GNRHRP30968 328 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 S100A10P60903 97 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 C3orf36Q3SXR2 165 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 ZNF718Q3SXZ3 478 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 BAP18Q8IXM2 172 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 GAPTQ8N292 157 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 CXorf58Q96LI9 332 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 CXXC4Q9H2H0 198 aa19.63■□□□□ 0.73
VPS16-201ENST00000380443 HS3ST1O14792 307 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 ERVS71-1P61550 626 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 ZNF154Q13106 437 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 MBNL2Q5VZF2 373 aaKnown RBP19.62■□□□□ 0.73
VPS16-201ENST00000380443 RDH5Q92781 318 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 GLS2Q9UI32 602 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 BET1O15155 118 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 PHF1O43189 567 aaPredicted RBP19.62■□□□□ 0.73
VPS16-201ENST00000380443 CECR9P0C854 216 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 TIMP3P35625 211 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 CMTM1Q8IZ96 169 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 TMEM56Q96MV1 263 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 TMEM222Q9H0R3 208 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 CYTL1Q9NRR1 136 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 TMEM56-RWDD3S4R434 201 aa19.62■□□□□ 0.73
VPS16-201ENST00000380443 MAP1BP46821 2468 aaKnown RBP19.61■□□□□ 0.73
VPS16-201ENST00000380443 ANKRD11Q6UB99 2663 aaPredicted RBP19.61■□□□□ 0.73
VPS16-201ENST00000380443 KRBOX1C9JBD0 128 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 E5RGE8 158 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 AGFG2O95081 481 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 NXPH2O95156 264 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 ZNF205O95201 554 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 HERPUD1Q15011 391 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 SP6Q3SY56 376 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 C1orf185Q5T7R7 199 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 SEM1Q6ZVN7 128 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 RBMXL3Q8N7X1 1067 aaKnown RBP19.61■□□□□ 0.73
VPS16-201ENST00000380443 KIRREL1Q96J84 757 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 SLC5A7Q9GZV3 580 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 HES4Q9HCC6 221 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 NSG2Q9Y328 171 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 CFAP47Q6ZTR5 3102 aa19.61■□□□□ 0.73
VPS16-201ENST00000380443 ZFHX4Q86UP3 3567 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 A8MXK9 166 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 CDS2O95674 445 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 FGF2P09038 288 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 GCH1P30793 250 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 MPV17P39210 176 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 EIF5AL1Q6IS14 154 aaKnown RBP19.6■□□□□ 0.73
VPS16-201ENST00000380443 OR10J5Q8NHC4 309 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 TLNRD1Q9H1K6 362 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 OPN3Q9H1Y3 402 aaPredicted RBP19.6■□□□□ 0.73
VPS16-201ENST00000380443 LAMA5O15230 3695 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 A0A1B0GWJ7 208 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 HSPB6O14558 160 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 CDIPTO14735 213 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 WNT2P09544 360 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 HKR1P10072 659 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 ZP3P21754 424 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 PCSK4Q6UW60 755 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 ZNF497Q6ZNH5 498 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 LYZL2Q7Z4W2 148 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 OR11L1Q8NGX0 322 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 SECTM1Q8WVN6 248 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 IL22RA2Q969J5 263 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 SPIN2AQ99865 258 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 SPIN2BQ9BPZ2 258 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 SLC25A15Q9Y619 301 aa19.6■□□□□ 0.73
VPS16-201ENST00000380443 IGKV1-6A0A0C4DH72 117 aa19.59■□□□□ 0.73
VPS16-201ENST00000380443 MKRN2OSH3BPM6 223 aa19.59■□□□□ 0.73
VPS16-201ENST00000380443 K7EPK0 472 aa19.59■□□□□ 0.73
VPS16-201ENST00000380443 SLC33A1O00400 549 aaPredicted RBP19.59■□□□□ 0.73
VPS16-201ENST00000380443 OR2H2O95918 312 aa19.59■□□□□ 0.73
VPS16-201ENST00000380443 ALKBH6Q3KRA9 238 aa19.59■□□□□ 0.73
VPS16-201ENST00000380443 TBC1D26Q86UD7 250 aa19.59■□□□□ 0.73
VPS16-201ENST00000380443 H1FOOQ8IZA3 346 aaPredicted RBP19.59■□□□□ 0.73
VPS16-201ENST00000380443 FAM71E2Q8N5Q1 922 aa19.59■□□□□ 0.73
VPS16-201ENST00000380443 RELL2Q8NC24 303 aaPredicted RBP19.59■□□□□ 0.73
VPS16-201ENST00000380443 C1QTNF6Q9BXI9 259 aa19.59■□□□□ 0.73
VPS16-201ENST00000380443 UBE2J1Q9Y385 318 aaPredicted RBP19.59■□□□□ 0.73
VPS16-201ENST00000380443 OR2W1Q9Y3N9 320 aa19.59■□□□□ 0.73
VPS16-201ENST00000380443 IGHV2OR16-5A0A0B4J2B6 119 aa19.58■□□□□ 0.73
VPS16-201ENST00000380443 IGHV1-18A0A0C4DH31 117 aa19.58■□□□□ 0.73
VPS16-201ENST00000380443 MSGN1A6NI15 193 aa19.58■□□□□ 0.73
VPS16-201ENST00000380443 LMO1P25800 156 aa19.58■□□□□ 0.73
VPS16-201ENST00000380443 RPL12P30050 165 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms