RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 RTP5Q14D33 572 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 PRTGQ2VWP7 1150 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 LRRC10Q5BKY1 277 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 Q7L0L9 218 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 ABHD12BQ7Z5M8 362 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-201ENST00000379989 SPEM1Q8N4L4 309 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 RPP25Q9BUL9 199 aaKnown RBP6.49□□□□□ -1.37
CDKL5-201ENST00000379989 GPR84Q9NQS5 396 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 EHFQ9NZC4 300 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 CDH23Q9H251 3354 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 LAMA2P24043 3122 aaKnown RBP6.49□□□□□ -1.37
CDKL5-201ENST00000379989 GRIFINA4D1Z8 144 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 J3KRW8 73 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 TOX4O94842 621 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 GABRA2P47869 451 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 ARG2P78540 354 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 SLC17A1Q14916 467 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 FHL5Q5TD97 284 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 GPR157Q5UAW9 335 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 PTCRAQ6ISU1 281 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-201ENST00000379989 TMEM92Q6UXU6 159 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 C20orf196Q8IYI0 205 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 OR5AU1Q8NGC0 362 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 OR2I1PQ8NGU4 316 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 OR2T10Q8NGZ9 312 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 PARLQ9H300 379 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 ABI3Q9P2A4 366 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 GNG13Q9P2W3 67 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 CDC42EP3Q9UKI2 254 aa6.49□□□□□ -1.37
CDKL5-201ENST00000379989 SERINC4A6NH21 518 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 DIRC3C9JPN6 131 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 CDIPTO14735 213 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 NKX2-2O95096 273 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 SLC6A6P31641 620 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 FER1L6-AS1Q8NA97 138 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 CHST4Q8NCG5 386 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 MRPL24Q96A35 216 aaKnown RBP6.48□□□□□ -1.37
CDKL5-201ENST00000379989 CLDN23Q96B33 292 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 NMNAT3Q96T66 252 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 UBE2ZQ9H832 354 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-201ENST00000379989 CHODLQ9H9P2 273 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 LRIT1Q9P2V4 623 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 VDAC3Q9Y277 283 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 ZNF443Q9Y2A4 671 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-201ENST00000379989 SCN2AQ99250 2005 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 CENPVL1A0A0U1RR11 272 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 FIGNL2A6NMB9 653 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 TMEM212A6NML5 194 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 SH2D1BO14796 132 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 PTGER4P35408 488 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 C5orf64Q2M2E5 130 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 FFAR4Q5NUL3 377 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 WBP2NLQ6ICG8 309 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 SLC38A9Q8NBW4 561 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 OR4F17Q8NGA8 305 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 OR1K1Q8NGR3 316 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 OR4F4Q96R69 305 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 CCDC3Q9BQI4 270 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 AICDAQ9GZX7 198 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 PATZ1Q9HBE1 687 aaKnown RBP6.48□□□□□ -1.37
CDKL5-201ENST00000379989 C1orf123Q9NWV4 160 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 CISD1Q9NZ45 108 aaKnown RBP6.48□□□□□ -1.37
CDKL5-201ENST00000379989 IER3IP1Q9Y5U9 82 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 KIF26BQ2KJY2 2108 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 NSG1A0A0A6YYJ2 146 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 A0A1W2PR77 199 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 ZFP92A6NM28 416 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 ESDP10768 282 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 AZU1P20160 251 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 CD38P28907 300 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 OTX1P32242 354 aaPredicted RBP6.48□□□□□ -1.37
CDKL5-201ENST00000379989 CSNK1A1P48729 337 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 HHEXQ03014 270 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 LINC01590Q5TEZ4 76 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 C1QL3Q5VWW1 255 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 COX15Q7KZN9 410 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 TMEM217Q8N7C4 229 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 PSMF1Q92530 271 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 TMEM38BQ9NVV0 291 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 HRASLS2Q9NWW9 162 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 TRAPPC1Q9Y5R8 145 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 PXMP4Q9Y6I8 212 aa6.48□□□□□ -1.37
CDKL5-201ENST00000379989 IGHV1OR15-9A0A0B4J2B8 117 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 DCDC2BA2VCK2 349 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 HSPB2A8KAH6 182 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 LMO7DNF2Z398 122 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 H0YGG7 62 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 RAB29O14966 203 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 SERF1AO75920 110 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 BCL2P10415 239 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 IL3RAP26951 378 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 ARF3P61204 181 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-201ENST00000379989 OR1Q1Q15612 314 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 HSPB2Q16082 182 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 ATG4DQ86TL0 474 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-201ENST00000379989 VASH2Q86V25 355 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.47□□□□□ -1.37
CDKL5-201ENST00000379989 CA13Q8N1Q1 262 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 ARHGEF39Q8N4T4 335 aa6.47□□□□□ -1.37
CDKL5-201ENST00000379989 DTWD2Q8NBA8 298 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms