RNA–Protein interactions for RNA: ENST00000379698.8

SH3KBP1-202, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH3KBP1, Length 2,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-202ENST00000379698 SLC34A2O95436 690 aa11.2□□□□□ -0.62
SH3KBP1-202ENST00000379698 PRDX4Q13162 271 aa11.2□□□□□ -0.62
SH3KBP1-202ENST00000379698 WIPI1Q5MNZ9 446 aaPredicted RBP11.2□□□□□ -0.62
SH3KBP1-202ENST00000379698 BATF2Q8N1L9 274 aa11.2□□□□□ -0.62
SH3KBP1-202ENST00000379698 RAB39BQ96DA2 213 aa11.2□□□□□ -0.62
SH3KBP1-202ENST00000379698 RIMS4Q9H426 269 aaPredicted RBP11.2□□□□□ -0.62
SH3KBP1-202ENST00000379698 RFNGQ9Y644 331 aa11.2□□□□□ -0.62
SH3KBP1-202ENST00000379698 ATP23Q9Y6H3 246 aa11.2□□□□□ -0.62
SH3KBP1-202ENST00000379698 HSD17B6O14756 317 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 CST7O76096 145 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 SCAF4O95104 1147 aaKnown RBP11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 RFPL3SP0C7P2 107 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 S100GP29377 79 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 TAGLN2P37802 199 aaKnown RBP11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 HAAOP46952 286 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 UBE2KP61086 200 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 ODF3L1Q8IXM7 274 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 PLPPR1Q8TBJ4 325 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 ATP5SQ99766 215 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 PILRBQ9UKJ0 227 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 LIPGQ9Y5X9 500 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 IGKV1D-13A0A0B4J2D9 117 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 CXorf65A6NEN9 183 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 NTN3O00634 580 aaPredicted RBP11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 TXNL1O43396 289 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 CHST1O43916 411 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 DFFBO76075 338 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 TMEM50AO95807 157 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 IGKV1-13P0DP09 117 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 RPS10P46783 165 aaKnown RBP11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 ZFP36L1Q07352 338 aaKnown RBP11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 ICAM4Q14773 271 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 HERPUD1Q15011 391 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 HAGHQ16775 308 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 CEACAM21Q3KPI0 293 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 MKXQ8IYA7 352 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 ZDHHC23Q8IYP9 409 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 ABHD3Q8WU67 409 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 GTF3AQ92664 365 aaKnown RBP11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 SIRT7Q9NRC8 400 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 CCL28Q9NRJ3 127 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 MIOXQ9UGB7 285 aa11.19□□□□□ -0.62
SH3KBP1-202ENST00000379698 TRAPPC2LH3BP13 241 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 TAS2R30P59541 319 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 CDCP2Q5VXM1 449 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 PMS2CLQ68D20 193 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 ZNF429Q86V71 674 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 STX12Q86Y82 276 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 LURAP1LQ8IV03 231 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 TMEM217Q8N7C4 229 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 NEK7Q8TDX7 302 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 TVP23CQ96ET8 276 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 NIPSNAP3BQ9BS92 247 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 LINC00470Q9BZP3 86 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 NOSIPQ9Y314 301 aaKnown RBP11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 SHANK1Q9Y566 2161 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 WSB1Q9Y6I7 421 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 MRPL33O75394 65 aaKnown RBP11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 KIAA0141Q14154 515 aaPredicted RBP11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 KHDC3LQ587J8 217 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 MRPL21Q7Z2W9 205 aaKnown RBP11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 LINC00596Q86U02 117 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 PLK3Q9H4B4 646 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 RNF115Q9Y4L5 304 aa11.18□□□□□ -0.62
SH3KBP1-202ENST00000379698 PPIHO43447 177 aaKnown RBP11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 PGLYRP1O75594 196 aaPredicted RBP11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 COX5BP10606 129 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 SLC25A6P12236 298 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 HOXA5P20719 270 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 GDF1P27539 372 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 DUSP3P51452 185 aaPredicted RBP11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 GPM6AP51674 278 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 SLC35E3Q7Z769 313 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 OR10G4Q8NGN3 311 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 CLDND2Q8NHS1 167 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 IGKV3D-15A0A087WSY6 115 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 TRAV1-1A0A0B4J248 108 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 IGKV1-6A0A0C4DH72 117 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 EPHA1P21709 976 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 F2RP25116 425 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 PAX9P55771 341 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 GFRA1P56159 465 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 RPS18P62269 152 aaKnown RBP11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 RPL23AP62750 156 aaKnown RBP11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 DLK1P80370 383 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 ARF1P84077 181 aaKnown RBP11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 RUNX1Q01196 453 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 ZNF154Q13106 437 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 RNPS1Q15287 305 aaKnown RBP11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 PPP1R32Q7Z5V6 425 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 CYB561D1Q8N8Q1 229 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 ZNF845Q96IR2 970 aaPredicted RBP11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 FGF23Q9GZV9 251 aaPredicted RBP11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 MTCH1Q9NZJ7 389 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 TAAR3PQ9P1P4 343 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 SIT1Q9Y3P8 196 aa11.17□□□□□ -0.62
SH3KBP1-202ENST00000379698 A0A1B0GU03 582 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 H0YL77 283 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 IFNA5P01569 189 aa11.16□□□□□ -0.62
SH3KBP1-202ENST00000379698 CEBPGP53567 150 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms