RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 OR4A4PQ8NGN8 299 aa18.21■□□□□ 0.51
CNTFR-202ENST00000378980 TMEM56Q96MV1 263 aa18.21■□□□□ 0.51
CNTFR-202ENST00000378980 TAAR6Q96RI8 345 aa18.21■□□□□ 0.51
CNTFR-202ENST00000378980 USB1Q9BQ65 265 aaKnown RBP18.21■□□□□ 0.51
CNTFR-202ENST00000378980 TMEM56-RWDD3S4R434 201 aa18.21■□□□□ 0.51
CNTFR-202ENST00000378980 RAB19A4D1S5 217 aa18.2■□□□□ 0.5
CNTFR-202ENST00000378980 GAPDHP04406 335 aaKnown RBP18.2■□□□□ 0.5
CNTFR-202ENST00000378980 RCC1P18754 421 aaPredicted RBP18.2■□□□□ 0.5
CNTFR-202ENST00000378980 TMEM33P57088 247 aa18.2■□□□□ 0.5
CNTFR-202ENST00000378980 FOXF2Q12947 444 aa18.2■□□□□ 0.5
CNTFR-202ENST00000378980 ZNF154Q13106 437 aa18.2■□□□□ 0.5
CNTFR-202ENST00000378980 UQCC3Q6UW78 93 aa18.2■□□□□ 0.5
CNTFR-202ENST00000378980 COQ3Q9NZJ6 369 aa18.2■□□□□ 0.5
CNTFR-202ENST00000378980 AGFG2O95081 481 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 PGA5P0DJD9 388 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 MPV17P39210 176 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 BOLLQ8N9W6 283 aaKnown RBP18.19■□□□□ 0.5
CNTFR-202ENST00000378980 BPIFCQ8NFQ6 507 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 OR4D5Q8NGN0 318 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 KLF14Q8TD94 323 aaPredicted RBP18.19■□□□□ 0.5
CNTFR-202ENST00000378980 NRIP2Q9BQI9 281 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 CABLES2Q9BTV7 478 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 LPAR3Q9UBY5 353 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 UBE2J1Q9Y385 318 aaPredicted RBP18.19■□□□□ 0.5
CNTFR-202ENST00000378980 INTS1Q8N201 2190 aaKnown RBP18.19■□□□□ 0.5
CNTFR-202ENST00000378980 AHRRA9YTQ3 701 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 MDH2P40926 338 aaKnown RBP18.19■□□□□ 0.5
CNTFR-202ENST00000378980 EIF5AL1Q6IS14 154 aaKnown RBP18.19■□□□□ 0.5
CNTFR-202ENST00000378980 ZADH2Q8N4Q0 377 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 CCL28Q9NRJ3 127 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 PLSCR4Q9NRQ2 329 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 TREM2Q9NZC2 230 aa18.19■□□□□ 0.5
CNTFR-202ENST00000378980 CDIPTO14735 213 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 HSD17B6O14756 317 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 JTBO76095 146 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 CDS2O95674 445 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 OR2H2O95918 312 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 ZNF169Q14929 603 aaPredicted RBP18.18■□□□□ 0.5
CNTFR-202ENST00000378980 OR8G1Q15617 311 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.18■□□□□ 0.5
CNTFR-202ENST00000378980 MS4A7Q9GZW8 240 aaPredicted RBP18.18■□□□□ 0.5
CNTFR-202ENST00000378980 DKK4Q9UBT3 224 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 TMEM210A6NLX4 147 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 SLC33A1O00400 549 aaPredicted RBP18.18■□□□□ 0.5
CNTFR-202ENST00000378980 ST8SIA3O43173 380 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 ZNF324BQ6AW86 544 aaPredicted RBP18.18■□□□□ 0.5
CNTFR-202ENST00000378980 H1FOOQ8IZA3 346 aaPredicted RBP18.18■□□□□ 0.5
CNTFR-202ENST00000378980 PRSS33Q8NF86 280 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 ARL11Q969Q4 196 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 ERGIC1Q969X5 290 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 ZDHHC8Q9ULC8 765 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 POMT1Q9Y6A1 747 aa18.18■□□□□ 0.5
CNTFR-202ENST00000378980 ZNF705EA8MWA4 302 aaPredicted RBP18.17■□□□□ 0.5
CNTFR-202ENST00000378980 H0YL77 283 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 SIRPB1O00241 398 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 WDR1O75083 606 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 ZNF146Q15072 292 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 SHEQ5VZ18 495 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 MOB1BQ7L9L4 216 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 ZNF695Q8IW36 515 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 SELENOHQ8IZQ5 122 aaKnown RBP18.17■□□□□ 0.5
CNTFR-202ENST00000378980 OR10J5Q8NHC4 309 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 C17orf50Q8WW18 174 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 SMIM3Q9BZL3 60 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 GLS2Q9UI32 602 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 OR2W1Q9Y3N9 320 aa18.17■□□□□ 0.5
CNTFR-202ENST00000378980 NKX2-6A6NCS4 301 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 GPR137BO60478 399 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 TNFSF13O75888 250 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 NXPH2O95156 264 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 CEACAM1P13688 526 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 UCP1P25874 307 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 P2RY1P47900 373 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 MST1LQ2TV78 715 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 GPR157Q5UAW9 335 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 ZNF497Q6ZNH5 498 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 CMTM1Q8IZ96 169 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 PLPPR1Q8TBJ4 325 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 SAT2Q96F10 170 aaPredicted RBP18.16■□□□□ 0.5
CNTFR-202ENST00000378980 KIRREL1Q96J84 757 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 GPHA2Q96T91 129 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 GTF3C1Q12789 2109 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 NUDT19A8MXV4 375 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 APOC3P02656 99 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 RTP5Q14D33 572 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 CXorf67Q86X51 503 aaPredicted RBP18.16■□□□□ 0.5
CNTFR-202ENST00000378980 DMBX1Q8NFW5 382 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 LILRB1Q8NHL6 650 aaPredicted RBP18.16■□□□□ 0.5
CNTFR-202ENST00000378980 SMIM8Q96KF7 97 aa18.16■□□□□ 0.5
CNTFR-202ENST00000378980 RCL1Q9Y2P8 373 aaKnown RBP18.16■□□□□ 0.5
CNTFR-202ENST00000378980 PRR14LQ5THK1 2151 aa18.15■□□□□ 0.5
CNTFR-202ENST00000378980 DUXBA0A1W2PPF3 345 aa18.15■□□□□ 0.5
CNTFR-202ENST00000378980 NPIPB11E5RHQ5 1161 aa18.15■□□□□ 0.5
CNTFR-202ENST00000378980 GRPP07492 148 aa18.15■□□□□ 0.5
CNTFR-202ENST00000378980 CECR9P0C854 216 aa18.15■□□□□ 0.5
CNTFR-202ENST00000378980 IGFL3Q6UXB1 125 aa18.15■□□□□ 0.5
CNTFR-202ENST00000378980 UBAC2Q8NBM4 344 aa18.15■□□□□ 0.5
CNTFR-202ENST00000378980 OR8G5Q8NG78 346 aa18.15■□□□□ 0.5
CNTFR-202ENST00000378980 BSCL2Q96G97 398 aaPredicted RBP18.15■□□□□ 0.5
CNTFR-202ENST00000378980 SPIN2AQ99865 258 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms