RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 HLA-GP17693 338 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 SEC61A1P61619 476 aaKnown RBP14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 NCMAPQ5T1S8 102 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 DMRTC2Q8IXT2 367 aaPredicted RBP14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 GCSAMQ8N6F7 178 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 NGBQ9NPG2 151 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 GLS2Q9UI32 602 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 METRNQ9UJH8 293 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 CACNA1DQ01668 2161 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 SHISA9B4DS77 424 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 PPYP01298 95 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 GATA4P43694 442 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 HLA-DRB3P79483 266 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 ANKRD55Q3KP44 614 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 KCTD9Q7L273 389 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 OR5T2Q8NGG2 359 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 RASL12Q9NYN1 266 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 HSPB11Q9Y547 144 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 ROS1P08922 2347 aa14.59□□□□□ -0.07
THUMPD2-201ENST00000378727 POM121CA8CG34 1229 aa14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 UCP3P55916 312 aa14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 SNRPD2P62316 118 aaKnown RBP14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 TNFAIP6P98066 277 aaPredicted RBP14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 CD177Q8N6Q3 437 aa14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 LINC01560Q8TB33 94 aa14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 PLPPR2Q96GM1 343 aa14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 TMEM246Q9BRR3 403 aa14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 CLEC4MQ9H2X3 399 aaPredicted RBP14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 IL19Q9UHD0 177 aa14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 ZDHHC8Q9ULC8 765 aa14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 DIDO1Q9BTC0 2240 aaKnown RBP14.58□□□□□ -0.08
THUMPD2-201ENST00000378727 IFNL4K9M1U5 179 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 LHBP01229 141 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 TK1P04183 234 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 COL10A1Q03692 680 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 SRSF4Q08170 494 aaKnown RBP14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 ESRP2Q9H6T0 727 aaKnown RBP14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 CRYM-AS1A6NIL9 109 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 H7C1Q1 480 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 TUSC2O75896 110 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 CTXN2P0C2S0 81 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 OR3A1P47881 315 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 PIGPP57054 158 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 HERV-K104P61576 105 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 LPCAT3Q6P1A2 487 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 MOB1BQ7L9L4 216 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 BOLLQ8N9W6 283 aaKnown RBP14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 OR4A4PQ8NGN8 299 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 ASB13Q8WXK3 278 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 NEUROG1Q92886 237 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 GCM1Q9NP62 436 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 MBNL3Q9NUK0 354 aaKnown RBP14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 TRAPPC2LQ9UL33 140 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 WIPI2Q9Y4P8 454 aa14.57□□□□□ -0.08
THUMPD2-201ENST00000378727 IGKV1D-17A0A075B6S4 117 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 A0A0B4J2A0 478 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 PSG2P11465 335 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 COQ2Q96H96 371 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 KIRREL1Q96J84 757 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 CABLES2Q9BTV7 478 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 RSRP1Q9BUV0 290 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 SHPKQ9UHJ6 478 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 PCDHB10Q9UN67 800 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 KALRNO60229 2985 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 TRBV6-7A0A0A0MS04 114 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 E7EQL1 145 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 RGS11O94810 467 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 PRDX2P32119 198 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 LGALSLQ3ZCW2 172 aaPredicted RBP14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 FAM90A1Q86YD7 464 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 SLC38A6Q8IZM9 456 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 CA5BP1Q8WTZ4 195 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 PIK3IP1Q96FE7 263 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 SHARPINQ9H0F6 387 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 SLC2A9Q9NRM0 540 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 KIAA2026Q5HYC2 2103 aa14.56□□□□□ -0.08
THUMPD2-201ENST00000378727 IGHV3OR15-7A0A075B7D8 119 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 IGKV1D-13A0A0B4J2D9 117 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 CD8AP01732 235 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 IGKV1-13P0DP09 117 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 KCNJ3P48549 501 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 AESQ08117 197 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 PHLDA2Q53GA4 152 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 SLC35E4Q6ICL7 350 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 SGPP2Q8IWX5 399 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 OR11L1Q8NGX0 322 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 SEC22AQ96IW7 307 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 NDRG3Q9UGV2 375 aa14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 ERRFI1Q9UJM3 462 aaPredicted RBP14.55□□□□□ -0.08
THUMPD2-201ENST00000378727 TEX13DA0A0J9YY54 714 aaPredicted RBP14.54□□□□□ -0.08
THUMPD2-201ENST00000378727 TMEM30CPA0ZSE6 113 aa14.54□□□□□ -0.08
THUMPD2-201ENST00000378727 ZNF737O75373 536 aa14.54□□□□□ -0.08
THUMPD2-201ENST00000378727 DIRAS3O95661 229 aa14.54□□□□□ -0.08
THUMPD2-201ENST00000378727 IFNA2P01563 188 aa14.54□□□□□ -0.08
THUMPD2-201ENST00000378727 ADH4P08319 380 aa14.54□□□□□ -0.08
THUMPD2-201ENST00000378727 TNFSF4P23510 183 aa14.54□□□□□ -0.08
THUMPD2-201ENST00000378727 GNRHRP30968 328 aa14.54□□□□□ -0.08
THUMPD2-201ENST00000378727 ABCA11PQ4W5N1 156 aa14.54□□□□□ -0.08
THUMPD2-201ENST00000378727 FAM201AQ5SY85 155 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms