RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 RIMS4Q9H426 269 aaPredicted RBP13.11□□□□□ -0.31
CCDC107-204ENST00000378409 PATZ1Q9HBE1 687 aaKnown RBP13.11□□□□□ -0.31
CCDC107-204ENST00000378409 IGHV4-30-2A0A087WSY4 118 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 MEIKINA0A087WXM9 373 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 TRAV39A0A0B4J263 110 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 A0A1W2PQ09 198 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 FUOMA2VDF0 154 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 ORC5O43913 435 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 FCN3O75636 299 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 UPK1BO75841 260 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 MT-ND4P03905 459 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 DTYMKP23919 212 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 RCVRNP35243 200 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 ACTBP60709 375 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 ACTG1P63261 375 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 SSBP1Q04837 148 aaKnown RBP13.1□□□□□ -0.31
CCDC107-204ENST00000378409 GAPTQ8N292 157 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 H1FXQ92522 213 aaKnown RBP13.1□□□□□ -0.31
CCDC107-204ENST00000378409 TRAPPC2LQ9UL33 140 aa13.1□□□□□ -0.31
CCDC107-204ENST00000378409 RBMX2Q9Y388 322 aaKnown RBP13.1□□□□□ -0.31
CCDC107-204ENST00000378409 ODAMA1E959 279 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 VWC2LB2RUY7 222 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 F5H0A9 414 aaPredicted RBP13.09□□□□□ -0.31
CCDC107-204ENST00000378409 WNT2P09544 360 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 P2RX3P56373 397 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 SEC61A1P61619 476 aaKnown RBP13.09□□□□□ -0.31
CCDC107-204ENST00000378409 PAX5Q02548 391 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 MALRD1Q5VYJ5 2156 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 ZNF57Q68EA5 555 aaPredicted RBP13.09□□□□□ -0.31
CCDC107-204ENST00000378409 OR52W1Q6IF63 320 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 ZNF841Q6ZN19 808 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 Q6ZPA2 131 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 CLDND2Q8NHS1 167 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 CLN8Q9UBY8 286 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 ARHGAP32A7KAX9 2087 aa13.09□□□□□ -0.31
CCDC107-204ENST00000378409 TRBV6-6A0A0A6YYG2 114 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 LINC00854A0A1B0GVQ3 168 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 MEX3AA1L020 520 aaKnown RBP13.08□□□□□ -0.32
CCDC107-204ENST00000378409 IGHV2-5P01817 119 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 GSTT2BP0CG30 244 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 RCC1P18754 421 aaPredicted RBP13.08□□□□□ -0.32
CCDC107-204ENST00000378409 ERP29P30040 261 aaKnown RBP13.08□□□□□ -0.32
CCDC107-204ENST00000378409 GLP1RP43220 463 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 Q5PR19 223 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 MOB1BQ7L9L4 216 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 HOGA1Q86XE5 327 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 TOMM5Q8N4H5 51 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 BEST4Q8NFU0 473 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 SNAPC3Q92966 411 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 DCTN5Q9BTE1 182 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 ZNF286AQ9HBT8 521 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 Q9N2K0 584 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 TAS2R8Q9NYW2 309 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 ANAPC10Q9UM13 185 aa13.08□□□□□ -0.32
CCDC107-204ENST00000378409 IGKV1D-8A0A087WSZ0 117 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 ANKRD20A5PA0PJZ0 165 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 CSF1P09603 554 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 SLC25A16P16260 332 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 NAT1P18440 290 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 HLA-DMAP28067 261 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 NPY4RP50391 375 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 GNB2P62879 340 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 RPL31P62899 125 aaKnown RBP13.07□□□□□ -0.32
CCDC107-204ENST00000378409 IFITM3Q01628 133 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 DCTN2Q13561 401 aaKnown RBP13.07□□□□□ -0.32
CCDC107-204ENST00000378409 ESCO2Q56NI9 601 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 WDR25Q64LD2 544 aaPredicted RBP13.07□□□□□ -0.32
CCDC107-204ENST00000378409 STEAP3Q658P3 488 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 ZNF880Q6PDB4 577 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 OR13A1Q8NGR1 328 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 MRGPRDQ8TDS7 321 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 RAB39BQ96DA2 213 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 C19orf12Q9NSK7 152 aa13.07□□□□□ -0.32
CCDC107-204ENST00000378409 ITPR2Q14571 2701 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 IGHV4-61A0A0C4DH41 118 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 hADV38S2A0JD32 116 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 POM121CA8CG34 1229 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 ZNF736B4DX44 427 aaPredicted RBP13.06□□□□□ -0.32
CCDC107-204ENST00000378409 PHF1O43189 567 aaPredicted RBP13.06□□□□□ -0.32
CCDC107-204ENST00000378409 ECDO95905 644 aaPredicted RBP13.06□□□□□ -0.32
CCDC107-204ENST00000378409 TAS2R19P59542 299 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 AP3S2P59780 193 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 ARPC4P59998 168 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 LMO4P61968 165 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 HLA-DRB3P79483 266 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 KLF9Q13886 244 aaPredicted RBP13.06□□□□□ -0.32
CCDC107-204ENST00000378409 SRSF7Q16629 238 aaKnown RBP eCLIP13.06□□□□□ -0.32
CCDC107-204ENST00000378409 CHRFAM7AQ494W8 412 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 C6orf183Q5T699 404 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 BTN2A1Q7KYR7 527 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 LYSMD2Q8IV50 215 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 FAM185AQ8N0U4 392 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 TMEM229BQ8NBD8 167 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 SSBP3Q9BWW4 388 aaPredicted RBP13.06□□□□□ -0.32
CCDC107-204ENST00000378409 NCOR1P1Q9H4R4 102 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 PALMDQ9NP74 551 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 MBNL3Q9NUK0 354 aaKnown RBP13.06□□□□□ -0.32
CCDC107-204ENST00000378409 KCNIP1Q9NZI2 227 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 OR6C3Q9NZP0 311 aa13.06□□□□□ -0.32
CCDC107-204ENST00000378409 MGAT4AQ9UM21 535 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms