RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 ODAMA1E959 279 aa17.6■□□□□ 0.41
CBWD3-202ENST00000377342 MEX3AA1L020 520 aaKnown RBP17.6■□□□□ 0.41
CBWD3-202ENST00000377342 TPPPO94811 219 aa17.6■□□□□ 0.41
CBWD3-202ENST00000377342 MT-ND4P03905 459 aa17.6■□□□□ 0.41
CBWD3-202ENST00000377342 SPANXN2Q5MJ10 180 aa17.6■□□□□ 0.41
CBWD3-202ENST00000377342 BTN2A1Q7KYR7 527 aa17.6■□□□□ 0.41
CBWD3-202ENST00000377342 CIARTQ8N365 385 aaPredicted RBP17.6■□□□□ 0.41
CBWD3-202ENST00000377342 DACT3Q96B18 629 aaPredicted RBP17.6■□□□□ 0.41
CBWD3-202ENST00000377342 C1orf159Q96HA4 380 aa17.6■□□□□ 0.41
CBWD3-202ENST00000377342 TRAV39A0A0B4J263 110 aa17.59■□□□□ 0.41
CBWD3-202ENST00000377342 GPR37O15354 613 aa17.59■□□□□ 0.41
CBWD3-202ENST00000377342 GNG2P59768 71 aa17.59■□□□□ 0.41
CBWD3-202ENST00000377342 ARFRP1Q13795 201 aa17.59■□□□□ 0.41
CBWD3-202ENST00000377342 PYHIN1Q6K0P9 492 aa17.59■□□□□ 0.41
CBWD3-202ENST00000377342 OR4K15Q8NH41 348 aa17.59■□□□□ 0.41
CBWD3-202ENST00000377342 MEIKINA0A087WXM9 373 aa17.58■□□□□ 0.41
CBWD3-202ENST00000377342 INHBBP09529 407 aa17.58■□□□□ 0.41
CBWD3-202ENST00000377342 CD3GP09693 182 aa17.58■□□□□ 0.41
CBWD3-202ENST00000377342 RPL31P62899 125 aaKnown RBP17.58■□□□□ 0.41
CBWD3-202ENST00000377342 LCN2P80188 198 aa17.58■□□□□ 0.41
CBWD3-202ENST00000377342 PAX2Q02962 417 aa17.58■□□□□ 0.41
CBWD3-202ENST00000377342 ZNF880Q6PDB4 577 aa17.58■□□□□ 0.41
CBWD3-202ENST00000377342 OR13A1Q8NGR1 328 aa17.58■□□□□ 0.41
CBWD3-202ENST00000377342 C8orf46Q8TAG6 207 aa17.58■□□□□ 0.41
CBWD3-202ENST00000377342 RPUSD1Q9UJJ7 312 aaKnown RBP17.58■□□□□ 0.41
CBWD3-202ENST00000377342 ACANP16112 2415 aa17.58■□□□□ 0.41
CBWD3-202ENST00000377342 TRBV23-1A0A0A0MS06 115 aa17.58■□□□□ 0.4
CBWD3-202ENST00000377342 TRBV6-6A0A0A6YYG2 114 aa17.58■□□□□ 0.4
CBWD3-202ENST00000377342 FCGR3AP08637 254 aa17.58■□□□□ 0.4
CBWD3-202ENST00000377342 DGCR2P98153 550 aa17.58■□□□□ 0.4
CBWD3-202ENST00000377342 ZNF273Q14593 569 aa17.58■□□□□ 0.4
CBWD3-202ENST00000377342 GPX8Q8TED1 209 aa17.58■□□□□ 0.4
CBWD3-202ENST00000377342 NCOR1P1Q9H4R4 102 aa17.58■□□□□ 0.4
CBWD3-202ENST00000377342 MBNL3Q9NUK0 354 aaKnown RBP17.58■□□□□ 0.4
CBWD3-202ENST00000377342 MEIS3P1A6NDR6 274 aa17.57■□□□□ 0.4
CBWD3-202ENST00000377342 HEXAP06865 529 aa17.57■□□□□ 0.4
CBWD3-202ENST00000377342 RCC1P18754 421 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-202ENST00000377342 PRSS3P35030 304 aa17.57■□□□□ 0.4
CBWD3-202ENST00000377342 RNASE12Q5GAN4 147 aaKnown RBP17.57■□□□□ 0.4
CBWD3-202ENST00000377342 LY6G5BQ8NDX9 201 aa17.57■□□□□ 0.4
CBWD3-202ENST00000377342 CCDC107Q8WV48 283 aa17.57■□□□□ 0.4
CBWD3-202ENST00000377342 SRRQ9GZT4 340 aa17.57■□□□□ 0.4
CBWD3-202ENST00000377342 LPAR2Q9HBW0 351 aa17.57■□□□□ 0.4
CBWD3-202ENST00000377342 RABL2AQ9UBK7 228 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-202ENST00000377342 ZNF230Q9UIE0 474 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-202ENST00000377342 RABL2BQ9UNT1 228 aa17.57■□□□□ 0.4
CBWD3-202ENST00000377342 POLR3KQ9Y2Y1 108 aaPredicted RBP17.57■□□□□ 0.4
CBWD3-202ENST00000377342 H7C1Q1 480 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 CTDSPLO15194 276 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 FOXH1O75593 365 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 PTBP1P26599 531 aaKnown RBP eCLIP17.56■□□□□ 0.4
CBWD3-202ENST00000377342 GLP1RP43220 463 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 PITPNAQ00169 270 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 MEF2CQ06413 473 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-202ENST00000377342 LSAMPQ13449 338 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 C11orf91Q3C1V1 193 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 TMEM200BQ69YZ2 307 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 TRAPPC6BQ86SZ2 158 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 OR52I2Q8NH67 350 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 SMIM4Q8WVI0 70 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 MAFIPQ8WZ33 124 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 CHMP1AQ9HD42 196 aaPredicted RBP17.56■□□□□ 0.4
CBWD3-202ENST00000377342 ABCA1O95477 2261 aa17.56■□□□□ 0.4
CBWD3-202ENST00000377342 LOC105371242A0A075B767 164 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 FUOMA2VDF0 154 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 ECDO95905 644 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-202ENST00000377342 LPLP06858 475 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 TMEM249Q2WGJ8 235 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 C5orf24Q7Z6I8 188 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 FAM185AQ8N0U4 392 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 GVQW1Q8N7I0 195 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 MRGPRDQ8TDS7 321 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 C15orf40Q8WUR7 153 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 SDHCQ99643 169 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-202ENST00000377342 RIMS4Q9H426 269 aaPredicted RBP17.55■□□□□ 0.4
CBWD3-202ENST00000377342 SCPEP1Q9HB40 452 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 Q9N2K0 584 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 ANAPC10Q9UM13 185 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 LINC00312Q9Y6C7 94 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 IGKV1D-8A0A087WSZ0 117 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 IGHV4-31P0DP07 118 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 CCL3L1P16619 93 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 DTYMKP23919 212 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 MRPS15P82914 257 aaKnown RBP17.55■□□□□ 0.4
CBWD3-202ENST00000377342 ZNF45Q02386 682 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 CR1LQ2VPA4 569 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 MMP26Q9NRE1 261 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 OR6C3Q9NZP0 311 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 LPAR3Q9UBY5 353 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 TRAPPC2LQ9UL33 140 aa17.55■□□□□ 0.4
CBWD3-202ENST00000377342 hADV38S2A0JD32 116 aa17.54■□□□□ 0.4
CBWD3-202ENST00000377342 GABARAPH6UMI1 98 aa17.54■□□□□ 0.4
CBWD3-202ENST00000377342 CGB3P0DN86 165 aa17.54■□□□□ 0.4
CBWD3-202ENST00000377342 CGB7P0DN87 165 aa17.54■□□□□ 0.4
CBWD3-202ENST00000377342 SSTR5P35346 364 aa17.54■□□□□ 0.4
CBWD3-202ENST00000377342 DLX6P56179 175 aa17.54■□□□□ 0.4
CBWD3-202ENST00000377342 MRPS10P82664 201 aaKnown RBP17.54■□□□□ 0.4
CBWD3-202ENST00000377342 CD276Q5ZPR3 534 aa17.54■□□□□ 0.4
CBWD3-202ENST00000377342 MOB1BQ7L9L4 216 aa17.54■□□□□ 0.4
CBWD3-202ENST00000377342 SETD6Q8TBK2 473 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms