RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 PCDHB10Q9UN67 800 aa18.41■□□□□ 0.54
RNF39-202ENST00000376751 TRAV39A0A0B4J263 110 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 KRBOX1C9JBD0 128 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 SIRPB1O00241 398 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 CDIPTO14735 213 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 GLAP06280 429 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 PGA5P0DJD9 388 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 HOXB1P14653 301 aaPredicted RBP18.4■□□□□ 0.54
RNF39-202ENST00000376751 HLA-DRB3P79483 266 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 SPIN3Q5JUX0 258 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 TMEM268Q5VZI3 342 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 ZNF565Q8N9K5 539 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 ZNF610Q8N9Z0 462 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 SPERTQ8NA61 448 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 GALNT11Q8NCW6 608 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 PLPPR1Q8TBJ4 325 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 ZC4H2Q9NQZ6 224 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 CCL28Q9NRJ3 127 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 PLSCR4Q9NRQ2 329 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 COQ3Q9NZJ6 369 aa18.4■□□□□ 0.54
RNF39-202ENST00000376751 FBXO9Q9UK97 447 aaPredicted RBP18.4■□□□□ 0.54
RNF39-202ENST00000376751 GPR31O00270 319 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 CECR9P0C854 216 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 FAM157CP0CG43 387 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 HOXC12P31275 282 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 OR8G1Q15617 311 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 STARD4Q96DR4 205 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 BSCL2Q96G97 398 aaPredicted RBP18.39■□□□□ 0.53
RNF39-202ENST00000376751 FBXL17Q9UF56 701 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 TINAGQ9UJW2 476 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 ZDHHC8Q9ULC8 765 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 AHRRA9YTQ3 701 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 SLC33A1O00400 549 aaPredicted RBP18.39■□□□□ 0.53
RNF39-202ENST00000376751 HSD17B6O14756 317 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 MLNRO43193 412 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 OR2H2O95918 312 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 CGAP01215 116 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 CTXN2P0C2S0 81 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 SUN5Q8TC36 379 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 MS4A7Q9GZW8 240 aaPredicted RBP18.39■□□□□ 0.53
RNF39-202ENST00000376751 RHOFQ9HBH0 211 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 TAS2R3Q9NYW6 316 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 POLDIP2Q9Y2S7 368 aa18.39■□□□□ 0.53
RNF39-202ENST00000376751 GRPP07492 148 aa18.38■□□□□ 0.53
RNF39-202ENST00000376751 ZNF324BQ6AW86 544 aaPredicted RBP18.38■□□□□ 0.53
RNF39-202ENST00000376751 CABLES2Q9BTV7 478 aa18.38■□□□□ 0.53
RNF39-202ENST00000376751 NKX2-6A6NCS4 301 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 SIGLEC5O15389 551 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 IGFL3Q6UXB1 125 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 CLEC9AQ6UXN8 241 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 Q8IYB0 196 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 OR4D5Q8NGN0 318 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 OR4A4PQ8NGN8 299 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 LILRB1Q8NHL6 650 aaPredicted RBP18.37■□□□□ 0.53
RNF39-202ENST00000376751 ERGIC1Q969X5 290 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 KIRREL1Q96J84 757 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 SMIM3Q9BZL3 60 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 MGAQ8IWI9 3026 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 TAAR5O14804 337 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 NXPH2O95156 264 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 TMEM33P57088 247 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 HOXA4Q00056 320 aaPredicted RBP18.37■□□□□ 0.53
RNF39-202ENST00000376751 H1FOOQ8IZA3 346 aaPredicted RBP18.37■□□□□ 0.53
RNF39-202ENST00000376751 SELENOHQ8IZQ5 122 aaKnown RBP18.37■□□□□ 0.53
RNF39-202ENST00000376751 TMEM56Q96MV1 263 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 ZNF71Q9NQZ8 489 aaPredicted RBP18.37■□□□□ 0.53
RNF39-202ENST00000376751 OR1A1Q9P1Q5 309 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 PURGQ9UJV8 347 aaKnown RBP18.37■□□□□ 0.53
RNF39-202ENST00000376751 FZR1Q9UM11 496 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 PROCRQ9UNN8 238 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 UBE2J1Q9Y385 318 aaPredicted RBP18.37■□□□□ 0.53
RNF39-202ENST00000376751 TMED3Q9Y3Q3 217 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 TMEM56-RWDD3S4R434 201 aa18.37■□□□□ 0.53
RNF39-202ENST00000376751 K7EM74 188 aa18.36■□□□□ 0.53
RNF39-202ENST00000376751 NBL1P41271 181 aa18.36■□□□□ 0.53
RNF39-202ENST00000376751 ZNF497Q6ZNH5 498 aa18.36■□□□□ 0.53
RNF39-202ENST00000376751 BPIFCQ8NFQ6 507 aa18.36■□□□□ 0.53
RNF39-202ENST00000376751 E5RGE8 158 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 IGLV1-44P01699 117 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 CEBPDP49716 269 aaPredicted RBP18.35■□□□□ 0.53
RNF39-202ENST00000376751 SRPXP78539 464 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 MST1LQ2TV78 715 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 DMBX1Q8NFW5 382 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 OR8G5Q8NG78 346 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 RNF141Q8WVD5 230 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 PLEKHA2Q9HB19 425 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 OBP2BQ9NPH6 170 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 RCL1Q9Y2P8 373 aaKnown RBP18.35■□□□□ 0.53
RNF39-202ENST00000376751 NSG2Q9Y328 171 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 HEATR1Q9H583 2144 aaKnown RBP18.35■□□□□ 0.53
RNF39-202ENST00000376751 IGHV1-18A0A0C4DH31 117 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 MBD3L4A6NDZ8 208 aaPredicted RBP18.35■□□□□ 0.53
RNF39-202ENST00000376751 MBD3L3A6NE82 208 aaPredicted RBP18.35■□□□□ 0.53
RNF39-202ENST00000376751 MBD3L5A6NJ08 208 aaPredicted RBP18.35■□□□□ 0.53
RNF39-202ENST00000376751 TNFSF12O43508 249 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 HOXD4P09016 255 aaPredicted RBP18.35■□□□□ 0.53
RNF39-202ENST00000376751 ZNF146Q15072 292 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 Q6ZR03 302 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 ZNF826PQ6ZT77 177 aa18.35■□□□□ 0.53
RNF39-202ENST00000376751 C11orf53Q8IXP5 236 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms