RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 KCNJ3P48549 501 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 FOXF2Q12947 444 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 PSG7Q13046 419 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 ACSF3Q4G176 576 aaPredicted RBP17.19■□□□□ 0.34
VSX1-202ENST00000376709 OR52M1Q8NGK5 317 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 IFT22Q9H7X7 185 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 PLEKHA2Q9HB19 425 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 TMEM100Q9NV29 134 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 IGKV1D-13A0A0B4J2D9 117 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 IGHV3-64DA0A0J9YX35 117 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 IQCF6A8MYZ5 107 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 TUSC2O75896 110 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 IGKV1-13P0DP09 117 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 CBR1P16152 277 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 SELEP16581 610 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 RCC1P18754 421 aaPredicted RBP17.19■□□□□ 0.34
VSX1-202ENST00000376709 EIF5AL1Q6IS14 154 aaKnown RBP17.19■□□□□ 0.34
VSX1-202ENST00000376709 LDLRAD3Q86YD5 345 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 BPIFCQ8NFQ6 507 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 MARC2Q969Z3 335 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 NARS2Q96I59 477 aaKnown RBP17.19■□□□□ 0.34
VSX1-202ENST00000376709 TAAR6Q96RI8 345 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 FBXL17Q9UF56 701 aa17.19■□□□□ 0.34
VSX1-202ENST00000376709 SVILO95425 2214 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 TRBV6-6A0A0A6YYG2 114 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 CDIPTO14735 213 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 HSD17B6O14756 317 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 IGKV3-15P01624 115 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 TMEM33P57088 247 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 ZNF154Q13106 437 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 ZNF169Q14929 603 aaPredicted RBP17.18■□□□□ 0.34
VSX1-202ENST00000376709 OR8G1Q15617 311 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 C1orf162Q8NEQ5 155 aaPredicted RBP17.18■□□□□ 0.34
VSX1-202ENST00000376709 OR10J5Q8NHC4 309 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 KLF14Q8TD94 323 aaPredicted RBP17.18■□□□□ 0.34
VSX1-202ENST00000376709 AHRRA9YTQ3 701 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 SIRPB1O00241 398 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 KLK10O43240 276 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 NXPH2O95156 264 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 RND3P61587 244 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 HLA-DRB3P79483 266 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 Q6P435 159 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 ZNF695Q8IW36 515 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 CMTM1Q8IZ96 169 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 OR4A4PQ8NGN8 299 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 SMIM3Q9BZL3 60 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 OBP2BQ9NPH6 170 aa17.18■□□□□ 0.34
VSX1-202ENST00000376709 LOC105371267A0A1B0GV96 52 aa17.17■□□□□ 0.34
VSX1-202ENST00000376709 ZNF705EA8MWA4 302 aaPredicted RBP17.17■□□□□ 0.34
VSX1-202ENST00000376709 ST8SIA3O43173 380 aa17.17■□□□□ 0.34
VSX1-202ENST00000376709 GRPP07492 148 aa17.17■□□□□ 0.34
VSX1-202ENST00000376709 PXDC1Q5TGL8 231 aa17.17■□□□□ 0.34
VSX1-202ENST00000376709 GPHA2Q96T91 129 aa17.17■□□□□ 0.34
VSX1-202ENST00000376709 CCL28Q9NRJ3 127 aa17.17■□□□□ 0.34
VSX1-202ENST00000376709 AMDHD2Q9Y303 409 aa17.17■□□□□ 0.34
VSX1-202ENST00000376709 WDR1O75083 606 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 JTBO76095 146 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 OR2H2O95918 312 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 MPV17P39210 176 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 ATRAIDQ6UW56 229 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 PCSK4Q6UW60 755 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 WDR31Q8NA23 367 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 IL1F10Q8WWZ1 152 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 KIRREL1Q96J84 757 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 COL25A1Q9BXS0 654 aaPredicted RBP17.16■□□□□ 0.34
VSX1-202ENST00000376709 PLSCR4Q9NRQ2 329 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 INTS1Q8N201 2190 aaKnown RBP17.16■□□□□ 0.34
VSX1-202ENST00000376709 H0YL77 283 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 FAM157CP0CG43 387 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 PGA5P0DJD9 388 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 MDH2P40926 338 aaKnown RBP17.16■□□□□ 0.34
VSX1-202ENST00000376709 ERVK11-1P61568 191 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 ZNF880Q6PDB4 577 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 ARL11Q969Q4 196 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 NRIP2Q9BQI9 281 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 LPAR3Q9UBY5 353 aa17.16■□□□□ 0.34
VSX1-202ENST00000376709 RAB19A4D1S5 217 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 TSPAN4O14817 238 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 AKR1C2P52895 323 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 AKR1C1Q04828 323 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 CXorf67Q86X51 503 aaPredicted RBP17.15■□□□□ 0.34
VSX1-202ENST00000376709 TMEM56Q96MV1 263 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 USB1Q9BQ65 265 aaKnown RBP17.15■□□□□ 0.34
VSX1-202ENST00000376709 TINAGQ9UJW2 476 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 PROCRQ9UNN8 238 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 OR2W1Q9Y3N9 320 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 TMEM56-RWDD3S4R434 201 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 NKX2-6A6NCS4 301 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 TMEM210A6NLX4 147 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 SLC33A1O00400 549 aaPredicted RBP17.15■□□□□ 0.34
VSX1-202ENST00000376709 TNFSF12O43508 249 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 CDS2O95674 445 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 GAPDHP04406 335 aaKnown RBP17.15■□□□□ 0.34
VSX1-202ENST00000376709 S100GP29377 79 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 ARHGDIBP52566 201 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 UQCC3Q6UW78 93 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 CLEC9AQ6UXN8 241 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 TREM2Q9NZC2 230 aa17.15■□□□□ 0.34
VSX1-202ENST00000376709 GNMTQ14749 295 aa17.14■□□□□ 0.33
VSX1-202ENST00000376709 PRR18Q8N4B5 295 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms