RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 ARL11Q969Q4 196 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 GLRX2Q9NS18 164 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 RTTNQ86VV8 2226 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 A0A096LPE4 126 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 A0A0G2JRQ6 117 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 C3orf85A0A1B0GTC6 90 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 A0A1W2PPZ6 126 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 MEX3AA1L020 520 aaKnown RBP8.16□□□□□ -1.1
TRIM39-202ENST00000376659 E5RGE8 158 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 KALRNO60229 2985 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 IGKV1-39P01597 117 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 IGKV1D-39P04432 117 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 ACAA1P09110 424 aaPredicted RBP8.16□□□□□ -1.1
TRIM39-202ENST00000376659 SEC11BP0C7V7 166 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 COTL1Q14019 142 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 IGFBP7Q16270 282 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 CLEC9AQ6UXN8 241 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 CBLN2Q8IUK8 224 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 SPAG16Q8N0X2 631 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 OR5A2Q8NGI9 324 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 SVIPQ8NHG7 77 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 SFT2D1Q8WV19 159 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 PIGCQ92535 297 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 APOBEC3DQ96AK3 386 aaPredicted RBP8.16□□□□□ -1.1
TRIM39-202ENST00000376659 ABHD14BQ96IU4 210 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 CLCF1Q9UBD9 225 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 NSG2Q9Y328 171 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 ATP23Q9Y6H3 246 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 TRAPPC6AO75865 159 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 FOLR2P14207 255 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 EPHA1P21709 976 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 RBMXP38159 391 aaKnown RBP8.16□□□□□ -1.1
TRIM39-202ENST00000376659 AIMP2Q13155 320 aaKnown RBP8.16□□□□□ -1.1
TRIM39-202ENST00000376659 ZDHHC23Q8IYP9 409 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 H1FOOQ8IZA3 346 aaPredicted RBP8.16□□□□□ -1.1
TRIM39-202ENST00000376659 OR5L1Q8NGL2 311 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 C5orf30Q96GV9 206 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 SSX3Q99909 188 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 TMEM231Q9H6L2 316 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 PARPBPQ9NWS1 579 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 PLA2G3Q9NZ20 509 aa8.16□□□□□ -1.1
TRIM39-202ENST00000376659 C5orf49A4QMS7 147 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 FAM166BA8MTA8 275 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 ZNF705EA8MWA4 302 aaPredicted RBP8.15□□□□□ -1.1
TRIM39-202ENST00000376659 PROB1E7EW31 1015 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 MRPL33O75394 65 aaKnown RBP8.15□□□□□ -1.1
TRIM39-202ENST00000376659 JTBO76095 146 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 GPX4P36969 197 aaPredicted RBP8.15□□□□□ -1.1
TRIM39-202ENST00000376659 MEOX1P50221 254 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 PHLDA2Q53GA4 152 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 GPR157Q5UAW9 335 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 IGFL2Q6UWQ7 119 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 PIP4P1Q86T03 277 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 TBC1D26Q86UD7 250 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 FAM185AQ8N0U4 392 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 S100A13Q99584 98 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 OR51M1Q9H341 326 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 OPA3Q9H6K4 179 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 RAI1Q7Z5J4 1906 aaPredicted RBP8.15□□□□□ -1.1
TRIM39-202ENST00000376659 DOCK7Q96N67 2140 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 COLCA2A8K830 154 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 P0C879 139 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 CBR1P16152 277 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 S100A10P60903 97 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 ID3Q02535 119 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 MALLQ13021 153 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 TESK1Q15569 626 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 FBXW12Q6X9E4 464 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 SUMF2Q8NBJ7 301 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 IL22RA2Q969J5 263 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 PKIBQ9C010 78 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 STRADBQ9C0K7 418 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 TMED3Q9Y3Q3 217 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 RFNGQ9Y644 331 aa8.15□□□□□ -1.1
TRIM39-202ENST00000376659 DUXBA0A1W2PPF3 345 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 NKX2-6A6NCS4 301 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 CDRT15L2A8MXV6 281 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 M0R296 226 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 GPR37O15354 613 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 SLC34A2O95436 690 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 SFTA3P0C7M3 94 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 DUSP1P28562 367 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 TGIF1Q15583 401 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 SPSB3Q6PJ21 355 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 BATF2Q8N1L9 274 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 SVBPQ8N300 66 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 KDF1Q8NAX2 398 aaPredicted RBP8.15□□□□□ -1.11
TRIM39-202ENST00000376659 OR5D13Q8NGL4 314 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 EDARADDQ8WWZ3 215 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 TOLLIPQ9H0E2 274 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 TREM2Q9NZC2 230 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 SLC7A11Q9UPY5 501 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 MEMO1Q9Y316 297 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 DSCAML1Q8TD84 2053 aa8.15□□□□□ -1.11
TRIM39-202ENST00000376659 RHBDL1O75783 438 aa8.14□□□□□ -1.11
TRIM39-202ENST00000376659 TMEM11P17152 192 aa8.14□□□□□ -1.11
TRIM39-202ENST00000376659 NHLH2Q02577 135 aa8.14□□□□□ -1.11
TRIM39-202ENST00000376659 HIKESHIQ53FT3 197 aa8.14□□□□□ -1.11
TRIM39-202ENST00000376659 ZNF497Q6ZNH5 498 aa8.14□□□□□ -1.11
TRIM39-202ENST00000376659 TOMM40LQ969M1 308 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms