RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 KIF25Q9UIL4 384 aa11.74□□□□□ -0.53
HDAC6-204ENST00000376643 NPIPB11E5RHQ5 1161 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 HSPB6O14558 160 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 AMY1AP04745 511 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 AMY2AP04746 511 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 SNRNP70P08621 437 aaKnown RBP11.73□□□□□ -0.53
HDAC6-204ENST00000376643 CGB3P0DN86 165 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 CGB7P0DN87 165 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 IL3RAP26951 378 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 GDNFP39905 211 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 MED21Q13503 144 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 TMEM30BQ3MIR4 351 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 ZIK1Q3SY52 487 aaPredicted RBP11.73□□□□□ -0.53
HDAC6-204ENST00000376643 TCTEX1D4Q5JR98 221 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 NHLRC3Q5JS37 347 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 TMPRSS11AQ6ZMR5 421 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 SATL1Q86VE3 508 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 CBR4Q8N4T8 237 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 Q8NFD4 153 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 OR56B4Q8NH76 319 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 METTL9Q9H1A3 318 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 PPIL3Q9H2H8 161 aaKnown RBP11.73□□□□□ -0.53
HDAC6-204ENST00000376643 IFT22Q9H7X7 185 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.73□□□□□ -0.53
HDAC6-204ENST00000376643 IL36GQ9NZH8 169 aa11.73□□□□□ -0.53
HDAC6-204ENST00000376643 TRAV24A0A0B4J272 114 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 SERPINE3A8MV23 424 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 GABRPO00591 440 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 GAPDHP04406 335 aaKnown RBP11.72□□□□□ -0.53
HDAC6-204ENST00000376643 GABRB1P18505 474 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 GPR176Q14439 515 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 ZSCAN26Q16670 478 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 MPV17LQ2QL34 196 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 Q3ZCU0 254 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 RSBN1Q5VWQ0 802 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-204ENST00000376643 ZNF529Q6P280 563 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 RPL22L1Q6P5R6 122 aaKnown RBP11.72□□□□□ -0.53
HDAC6-204ENST00000376643 UNQ9370/PRO34162Q6UXP9 181 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 STX19Q8N4C7 294 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 DRAM1Q8N682 238 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 OR52M1Q8NGK5 317 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 OR13A1Q8NGR1 328 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 RHOXF1Q8NHV9 184 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 PDCD1LG2Q9BQ51 273 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 ZNF649Q9BS31 505 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 SPACA1Q9HBV2 294 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 TMEM138Q9NPI0 162 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 MRPS18AQ9NVS2 196 aaKnown RBP11.72□□□□□ -0.53
HDAC6-204ENST00000376643 PSG11Q9UQ72 335 aa11.72□□□□□ -0.53
HDAC6-204ENST00000376643 A0A1W2PPI3 338 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 TMEM30CPA0ZSE6 113 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 NUDT19A8MXV4 375 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 CCRL2O00421 344 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 HSD17B6O14756 317 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 TXNL1O43396 289 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 OR7C1O76099 320 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-204ENST00000376643 HTR3BO95264 441 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 MYCNOSP40205 109 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 RPL23AP62750 156 aaKnown RBP11.71□□□□□ -0.53
HDAC6-204ENST00000376643 ZNF816Q0VGE8 651 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-204ENST00000376643 VAX1Q5SQQ9 334 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 LPCAT4Q643R3 524 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 ASCL4Q6XD76 172 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 SLC35E3Q7Z769 313 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 C5orf56Q8N8D9 126 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 LINC00482Q8N8I6 264 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 C8orf31Q8N9H6 132 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 OR51A2Q8NGJ7 313 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 MRGPRDQ8TDS7 321 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 DPCDQ9BVM2 203 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-204ENST00000376643 ISG20L2Q9H9L3 353 aaKnown RBP11.71□□□□□ -0.53
HDAC6-204ENST00000376643 CKLFQ9UBR5 152 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 ST3GAL6Q9Y274 331 aa11.71□□□□□ -0.53
HDAC6-204ENST00000376643 LOC100130705A0A1B0GUX0 176 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 AP4M1O00189 453 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 RRP9O43818 475 aaKnown RBP11.7□□□□□ -0.54
HDAC6-204ENST00000376643 IGKV1D-33P01593 117 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 IGKV1-33P01594 117 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 MYL12AP19105 171 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 DCKP27707 260 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 ZNF93P35789 620 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-204ENST00000376643 GNG10P50151 68 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 EGFEM1PQ0D2K5 195 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 KIAA2026Q5HYC2 2103 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 DEFB121Q5J5C9 76 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 TEX38Q6PEX7 206 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 ZNF555Q8NEP9 628 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 OR8H1Q8NGG4 311 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 OR52I1Q8NGK6 324 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 OR52N1Q8NH53 320 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 TMEM106AQ96A25 262 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 RDH12Q96NR8 316 aa11.7□□□□□ -0.54
HDAC6-204ENST00000376643 H3BNX3 289 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 ORC5O43913 435 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 IGHG2P01859 326 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 GTF2F2P13984 249 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 BDKRB2P30411 391 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 SOX2P48431 317 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 THBS3P49746 956 aa11.69□□□□□ -0.54
HDAC6-204ENST00000376643 RBM11P57052 281 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms