RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 SULT4A1Q9BR01 284 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 PCGF1Q9BSM1 259 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 UNKLQ9H9P5 680 aaKnown RBP12.33□□□□□ -0.44
HSPG2-201ENST00000374673 PLEKHJ1Q9NW61 149 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 RHBDL2Q9NX52 303 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 ING3Q9NXR8 418 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 TAS2R3Q9NYW6 316 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 HIVEP2P31629 2446 aa12.33□□□□□ -0.44
HSPG2-201ENST00000374673 hCG_1809904A0A1W2PP81 198 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 A0A1W2PPE2 198 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 A0A1W2PR64 198 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 A0A1W2PRV1 198 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 UBE2QL1A1L167 161 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 CRLF1O75462 422 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 SCGNO76038 276 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 PRTN3P24158 256 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 MOGAT2Q3SYC2 334 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 CHRFAM7AQ494W8 412 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 IL17RELQ6ZVW7 336 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 OR13A1Q8NGR1 328 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 NANPQ8TBE9 248 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 ACOT12Q8WYK0 555 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 SLC25A38Q96DW6 304 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 ARHGAP5-AS1Q96IT6 56 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 CYYR1Q96J86 154 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 FAAP24Q9BTP7 215 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 BEX2Q9BXY8 128 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 PECRQ9BY49 303 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 ATG5Q9H1Y0 275 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 GAL3ST2Q9H3Q3 398 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 METTL8Q9H825 291 aaKnown RBP12.32□□□□□ -0.44
HSPG2-201ENST00000374673 KIAA2026Q5HYC2 2103 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 TLN2Q9Y4G6 2542 aa12.32□□□□□ -0.44
HSPG2-201ENST00000374673 TRAV40A0A0B4J280 105 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 MEX3AA1L020 520 aaKnown RBP12.31□□□□□ -0.44
HSPG2-201ENST00000374673 ZNF729A6NN14 1252 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-201ENST00000374673 ZNF701M0R085 212 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-201ENST00000374673 MT-ND4P03905 459 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 CGB3P0DN86 165 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 CGB7P0DN87 165 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 ZNF182P17025 639 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-201ENST00000374673 GLP1RP43220 463 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 KLF17Q5JT82 389 aaPredicted RBP12.31□□□□□ -0.44
HSPG2-201ENST00000374673 PLAC9Q5JTB6 97 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 RTN4RL2Q86UN3 420 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 ZNF565Q8N9K5 539 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 DYRK2Q92630 601 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 TNFRSF14Q92956 283 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 RAB3CQ96E17 227 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 SIRT7Q9NRC8 400 aa12.31□□□□□ -0.44
HSPG2-201ENST00000374673 SMIM31A0A1B0GVY4 71 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 CCDC160A6NGH7 325 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 MFNGO00587 321 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 CLPXO76031 633 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 IGHV1-8P0DP01 117 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 HIST1H1DP16402 221 aaKnown RBP12.3□□□□□ -0.44
HSPG2-201ENST00000374673 SRP14P37108 136 aaKnown RBP12.3□□□□□ -0.44
HSPG2-201ENST00000374673 ERVFRD-1P60508 538 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 ARL6IP1Q15041 203 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 C17orf58Q2M2W7 97 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 UBE2NLQ5JXB2 153 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 NCR3LG1Q68D85 454 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 MRPL30Q8TCC3 161 aaKnown RBP12.3□□□□□ -0.44
HSPG2-201ENST00000374673 DYNC2LI1Q8TCX1 351 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 MRGPRDQ8TDS7 321 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 AP3S1Q92572 193 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 CMTM3Q96MX0 182 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 ABCG5Q9H222 651 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 LINC00574Q9H8X3 128 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.3□□□□□ -0.44
HSPG2-201ENST00000374673 CCDC59Q9P031 241 aaKnown RBP12.3□□□□□ -0.44
HSPG2-201ENST00000374673 RSL24D1Q9UHA3 163 aaKnown RBP12.3□□□□□ -0.44
HSPG2-201ENST00000374673 KCNK7Q9Y2U2 307 aa12.3□□□□□ -0.44
HSPG2-201ENST00000374673 ANK3Q12955 4377 aaKnown RBP12.3□□□□□ -0.44
HSPG2-201ENST00000374673 A0A0A6YYH2 397 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 CENPVL3A0A0U1RRI6 287 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 KBTBD11-OT1A0A1B0GTJ5 212 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 A6NJ64 397 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 ORC5O43913 435 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 NAPSAO96009 420 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 IGHV4-38-2P0DP08 117 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 HOXB4P17483 251 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-201ENST00000374673 GZMHP20718 246 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 SOX6P35712 828 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 GUCA2AQ02747 115 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 GPR157Q5UAW9 335 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 HEPN1Q6WQI6 88 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 OR4K15Q8NH41 348 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 LHX4Q969G2 390 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 RIMS4Q9H426 269 aaPredicted RBP12.29□□□□□ -0.44
HSPG2-201ENST00000374673 MBNL3Q9NUK0 354 aaKnown RBP12.29□□□□□ -0.44
HSPG2-201ENST00000374673 CALYQ9NYX4 217 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 AK3Q9UIJ7 227 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 NUP50Q9UKX7 468 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 TRAPPC2LQ9UL33 140 aa12.29□□□□□ -0.44
HSPG2-201ENST00000374673 FN1P02751 2386 aaKnown RBP12.28□□□□□ -0.44
HSPG2-201ENST00000374673 TRBV6-6A0A0A6YYG2 114 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 TRAV39A0A0B4J263 110 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 POM121CA8CG34 1229 aa12.28□□□□□ -0.44
HSPG2-201ENST00000374673 SERPINE3A8MV23 424 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms