RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 ING3Q9NXR8 418 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 GLS2Q9UI32 602 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 MAB21L2Q9Y586 359 aa13.13□□□□□ -0.31
NIPAL3-204ENST00000374399 MYO18BQ8IUG5 2567 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 A0A1B0GW55 424 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 FABP7O15540 132 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 CD8AP01732 235 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 DUX4L2P0CJ85 424 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 DUX4L3P0CJ86 424 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 DUX4L4P0CJ87 422 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 DUX4L5P0CJ88 424 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 DUX4L6P0CJ89 424 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 DUX4L7P0CJ90 424 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 PAX5Q02548 391 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 METTL11BQ5VVY1 283 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 TEX36Q5VZQ5 186 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 ZNF626Q68DY1 528 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 DUX4L9Q6RFH8 374 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 TMED4Q7Z7H5 227 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 SLC25A42Q86VD7 318 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 CCDC107Q8WV48 283 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 TMEM230Q96A57 120 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 ZNF2Q9BSG1 426 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 SAP30LQ9HAJ7 183 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 DYNLRB1Q9NP97 96 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 DUX4Q9UBX2 424 aa13.12□□□□□ -0.31
NIPAL3-204ENST00000374399 POM121CA8CG34 1229 aa13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 CCNKO75909 580 aa13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 OR4E1P0C645 316 aa13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 CXCL3P19876 107 aa13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 SRSF1Q07955 248 aaKnown RBP eCLIP13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 AESQ08117 197 aa13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 BAMBIQ13145 260 aa13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 SLC35E4Q6ICL7 350 aa13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 C11orf71Q6IPW1 123 aa13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 MUC20Q8N307 709 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 FXYD6Q9H0Q3 95 aa13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 DNAJB11Q9UBS4 358 aa13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 RALYQ9UKM9 306 aaKnown RBP13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 DSCAML1Q8TD84 2053 aa13.11□□□□□ -0.31
NIPAL3-204ENST00000374399 SNRPGP15A8MWD9 76 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 DANCRP0C864 163 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 SULT1A3P0DMM9 295 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 SULT1A4P0DMN0 295 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 PI3P19957 117 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 FPR2P25090 351 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 FCGR2CP31995 323 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 HLA-DRB3P79483 266 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 CD276Q5ZPR3 534 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 TMEM17Q86X19 198 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 OR11L1Q8NGX0 322 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 SDSLQ96GA7 329 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 FYTTD1Q96QD9 318 aaKnown RBP13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 EGLN1Q9GZT9 426 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 RANGRFQ9HD47 186 aaPredicted RBP13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 KIF25Q9UIL4 384 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 KIR2DS1A0A191URI9 304 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 TMEM178BH3BS89 294 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 SOD3P08294 240 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 SELLP14151 372 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 ZBTB25P24278 435 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 KIR2DS4P43632 304 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 GABRA2P47869 451 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 GLIPR1P48060 266 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 DHODHQ02127 395 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 KIR2DS1Q14954 304 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 HMGN3Q15651 99 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 ZNRF1Q8ND25 227 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 CABLES2Q9BTV7 478 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 MED28Q9H204 178 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 TMEM106BQ9NUM4 274 aa13.1□□□□□ -0.31
NIPAL3-204ENST00000374399 TMEM30CPA0ZSE6 113 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 OOEPA6NGQ2 149 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 K7N7A8 449 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 TNFRSF13BO14836 293 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 TUSC2O75896 110 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 HNRNPCP07910 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 NFYAP23511 347 aaPredicted RBP13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 KCNJ3P48549 501 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 UBE2MP61081 183 aaKnown RBP13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 CD83Q01151 205 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 C2orf68Q2NKX9 166 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 LDLRAD3Q86YD5 345 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 TPRX1Q8N7U7 411 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 ASCC1Q8N9N2 400 aaKnown RBP13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 DEFB108BQ8NET1 73 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 TMEM185AQ8NFB2 350 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 SNX22Q96L94 193 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 GAFA1Q96PS6 74 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 SLC23A1Q9UHI7 598 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 CHD6Q8TD26 2715 aa13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 SPTAN1Q13813 2472 aaKnown RBP13.09□□□□□ -0.31
NIPAL3-204ENST00000374399 TRBV6-7A0A0A0MS04 114 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 H7C1Q1 480 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 FCN3O75636 299 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 RPS2P15880 293 aaKnown RBP13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 MUC1P15941 1255 aaPredicted RBP13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 AADACP22760 399 aa13.08□□□□□ -0.32
NIPAL3-204ENST00000374399 PPOXP50336 477 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms