RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 IGHV3-9P01782 118 aa9.8□□□□□ -0.84
PTPN20-204ENST00000374346 SCTP09683 121 aa9.8□□□□□ -0.84
PTPN20-204ENST00000374346 TSPAN7P41732 249 aa9.8□□□□□ -0.84
PTPN20-204ENST00000374346 NOVA1P51513 510 aaKnown RBP9.8□□□□□ -0.84
PTPN20-204ENST00000374346 GFRA1P56159 465 aa9.8□□□□□ -0.84
PTPN20-204ENST00000374346 ID3Q02535 119 aa9.8□□□□□ -0.84
PTPN20-204ENST00000374346 SSPNQ14714 243 aa9.8□□□□□ -0.84
PTPN20-204ENST00000374346 HIKESHIQ53FT3 197 aa9.8□□□□□ -0.84
PTPN20-204ENST00000374346 TRIM61Q5EBN2 209 aa9.8□□□□□ -0.84
PTPN20-204ENST00000374346 BATF2Q8N1L9 274 aa9.8□□□□□ -0.84
PTPN20-204ENST00000374346 MAGT1Q9H0U3 335 aa9.8□□□□□ -0.84
PTPN20-204ENST00000374346 IGKV3D-15A0A087WSY6 115 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 C5orf49A4QMS7 147 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 PROB1E7EW31 1015 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 HSD17B6O14756 317 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 SLC34A2O95436 690 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 ARG1P05089 322 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 SERPINA7P05543 415 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 ARF1P84077 181 aaKnown RBP9.79□□□□□ -0.84
PTPN20-204ENST00000374346 NMSQ5H8A3 153 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 CXorf66Q5JRM2 361 aaPredicted RBP9.79□□□□□ -0.84
PTPN20-204ENST00000374346 C1QL4Q86Z23 238 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 OR5A2Q8NGI9 324 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 PSMF1Q92530 271 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 A0A1W2PPE2 198 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 MED19A0JLT2 244 aaPredicted RBP9.79□□□□□ -0.84
PTPN20-204ENST00000374346 LRP5LA4QPB2 252 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 TUSC2O75896 110 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 CBR1P16152 277 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 MAS1LP35410 378 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 DYNLT3P51808 116 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 RPS18P62269 152 aaKnown RBP9.79□□□□□ -0.84
PTPN20-204ENST00000374346 RPL23AP62750 156 aaKnown RBP9.79□□□□□ -0.84
PTPN20-204ENST00000374346 IL24Q13007 206 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 SLC25A24Q6NUK1 477 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 UBALD2Q8IYN6 164 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 TMEM217Q8N7C4 229 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 ATP5SQ99766 215 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 RARRES2Q99969 163 aa9.79□□□□□ -0.84
PTPN20-204ENST00000374346 AP4M1O00189 453 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 HSPB6O14558 160 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 CST7O76096 145 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 SYNGR4O95473 234 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 IFNA5P01569 189 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 HSPB1P04792 205 aaKnown RBP9.78□□□□□ -0.84
PTPN20-204ENST00000374346 SERPINE2P07093 398 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 CEACAM1P13688 526 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 ARR3P36575 388 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 OR2B8PP59922 312 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 PLP2Q04941 152 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 Q0VFX4 171 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 TGIF1Q15583 401 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 OR10J5Q8NHC4 309 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 RNASE11Q8TAA1 199 aaKnown RBP9.78□□□□□ -0.84
PTPN20-204ENST00000374346 NANPQ8TBE9 248 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 TMEM171Q8WVE6 324 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 LRFN1Q9P244 771 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 A0A087WWC5 75 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 A0A096LPE4 126 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 A0A1W2PPZ6 126 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 CDRT15L2A8MXV6 281 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 CHST1O43916 411 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 SLC25A6P12236 298 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 DAZAP2Q15038 168 aaPredicted RBP9.78□□□□□ -0.84
PTPN20-204ENST00000374346 C6orf15Q6UXA7 325 aaPredicted RBP9.78□□□□□ -0.84
PTPN20-204ENST00000374346 LILRB1Q8NHL6 650 aaPredicted RBP9.78□□□□□ -0.84
PTPN20-204ENST00000374346 SIGLEC12Q96PQ1 595 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 NIPSNAP3BQ9BS92 247 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 CCL28Q9NRJ3 127 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 DEPPQ9NTK1 212 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 MTCH1Q9NZJ7 389 aa9.78□□□□□ -0.84
PTPN20-204ENST00000374346 TNRC6AQ8NDV7 1962 aaKnown RBP9.78□□□□□ -0.84
PTPN20-204ENST00000374346 A0A1B0GU03 582 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 ANKRD30BLA7E2S9 258 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 H3BQ15 152 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 PGLYRP1O75594 196 aaPredicted RBP9.77□□□□□ -0.85
PTPN20-204ENST00000374346 IGHV2-5P01817 119 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 F2RP25116 425 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 TAGLN2P37802 199 aaKnown RBP9.77□□□□□ -0.85
PTPN20-204ENST00000374346 UBE2KP61086 200 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 RPS23P62266 143 aaKnown RBP9.77□□□□□ -0.85
PTPN20-204ENST00000374346 SRYQ05066 204 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 HERPUD1Q15011 391 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 ZNF573Q86YE8 665 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 RAB40CQ96S21 281 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 FAM173AQ9BQD7 235 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 ZPBPQ9BS86 351 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 PRRG4Q9BZD6 226 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 HIPK2Q9H2X6 1198 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 SEBOXQ9HB31 216 aaPredicted RBP9.77□□□□□ -0.85
PTPN20-204ENST00000374346 GLRX2Q9NS18 164 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 OR2W1Q9Y3N9 320 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 WDFY3Q8IZQ1 3526 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 TRBV6-6A0A0A6YYG2 114 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 IGKV1D-13A0A0B4J2D9 117 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 CXorf65A6NEN9 183 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 CNOT4O95628 575 aaKnown RBP9.77□□□□□ -0.85
PTPN20-204ENST00000374346 HLA-HP01893 362 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 FABP1P07148 127 aa9.77□□□□□ -0.85
PTPN20-204ENST00000374346 IGKV1-13P0DP09 117 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms