RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 ZNF774Q6NX45 483 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 C1QL2Q7Z5L3 287 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 RTN4RL2Q86UN3 420 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 OR5D18Q8NGL1 313 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 TERB2Q8NHR7 220 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 NPRL2Q8WTW4 380 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 MITD1Q8WV92 249 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 SPSB1Q96BD6 273 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 CPNE2Q96FN4 548 aaPredicted RBP12.24□□□□□ -0.45
HMGA1-203ENST00000374116 CLCC1Q96S66 551 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 PHB2Q99623 299 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 CACFD1Q9UGQ2 172 aa12.24□□□□□ -0.45
HMGA1-203ENST00000374116 USP9YO00507 2555 aaPredicted RBP12.24□□□□□ -0.45
HMGA1-203ENST00000374116 ASH1LQ9NR48 2969 aaKnown RBP12.23□□□□□ -0.45
HMGA1-203ENST00000374116 LOC100509620A0A075B734 347 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 NBPF19A0A087WUL8 3843 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 RPL36A-HNRNPH2H7BZ11 118 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 GPR37O15354 613 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 CA11O75493 328 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 LYL1P12980 280 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 B4GALT1P15291 398 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 ZNF32P17041 273 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 RAB5AP20339 215 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 CPT2P23786 658 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 CCKARP32238 428 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 RAB4BP61018 213 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 IL13RA1P78552 427 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 RELQ04864 619 aaPredicted RBP12.23□□□□□ -0.45
HMGA1-203ENST00000374116 PPP1R1AQ13522 171 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 PPA1Q15181 289 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 LBHQ53QV2 105 aaPredicted RBP12.23□□□□□ -0.45
HMGA1-203ENST00000374116 Q6ZT83 130 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 LINC01560Q8TB33 94 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 REEP6Q96HR9 211 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 TOLLIPQ9H0E2 274 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 CRYBG3Q68DQ2 2970 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 A0A096LPE4 126 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 A0A1W2PPZ6 126 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 CEACAM18A8MTB9 384 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 SERPINE3A8MV23 424 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 FARS2O95363 451 aaKnown RBP12.23□□□□□ -0.45
HMGA1-203ENST00000374116 FCGR3AP08637 254 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 MMP7P09237 267 aaPredicted RBP12.23□□□□□ -0.45
HMGA1-203ENST00000374116 SERPINA2P20848 420 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 BLVRBP30043 206 aaPredicted RBP12.23□□□□□ -0.45
HMGA1-203ENST00000374116 TAS2R60P59551 318 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 PSG4Q00888 419 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 BEX5Q5H9J7 111 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 FGFBP3Q8TAT2 258 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 PIGTQ969N2 578 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 RBM14Q96PK6 669 aaKnown RBP12.23□□□□□ -0.45
HMGA1-203ENST00000374116 SCGB3A2Q96PL1 93 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 PECRQ9BY49 303 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 OR2H1Q9GZK4 316 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 RGCCQ9H4X1 137 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 TMEM231Q9H6L2 316 aa12.23□□□□□ -0.45
HMGA1-203ENST00000374116 SLC31A2O15432 143 aa12.22□□□□□ -0.45
HMGA1-203ENST00000374116 DUS4LO95620 317 aaKnown RBP12.22□□□□□ -0.45
HMGA1-203ENST00000374116 LCATP04180 440 aa12.22□□□□□ -0.45
HMGA1-203ENST00000374116 HKR1P10072 659 aa12.22□□□□□ -0.45
HMGA1-203ENST00000374116 ACKR3P25106 362 aa12.22□□□□□ -0.45
HMGA1-203ENST00000374116 TAS2R46P59540 309 aa12.22□□□□□ -0.45
HMGA1-203ENST00000374116 EIF5AP63241 154 aaKnown RBP12.22□□□□□ -0.45
HMGA1-203ENST00000374116 CNN3Q15417 329 aaKnown RBP12.22□□□□□ -0.45
HMGA1-203ENST00000374116 REC114Q7Z4M0 266 aa12.22□□□□□ -0.45
HMGA1-203ENST00000374116 OR5H2Q8NGV7 314 aa12.22□□□□□ -0.45
HMGA1-203ENST00000374116 WNT5BQ9H1J7 359 aa12.22□□□□□ -0.45
HMGA1-203ENST00000374116 ZNF705EA8MWA4 302 aaPredicted RBP12.21□□□□□ -0.45
HMGA1-203ENST00000374116 ZNF587BE7ETH6 402 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 HOXB5P09067 269 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 AKR1C4P17516 323 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 AMY2BP19961 511 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 HOXA5P20719 270 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 PSMB6P28072 239 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 DVL1P1P54792 670 aaPredicted RBP12.21□□□□□ -0.45
HMGA1-203ENST00000374116 MTCP1P56278 107 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 SPCS3P61009 180 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 HIKESHIQ53FT3 197 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 DMRTC1Q5HYR2 192 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 C9orf152Q5JTZ5 239 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 EIF5AL1Q6IS14 154 aaKnown RBP12.21□□□□□ -0.45
HMGA1-203ENST00000374116 BTNL8Q6UX41 500 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 UNQ6126/PRO20091Q6UXV3 157 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 ADAD2Q8NCV1 583 aaKnown RBP12.21□□□□□ -0.45
HMGA1-203ENST00000374116 AKR7LQ8NHP1 331 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 MARCH1Q8TCQ1 289 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 RNASE6Q93091 150 aaKnown RBP12.21□□□□□ -0.45
HMGA1-203ENST00000374116 S100PBPQ96BU1 408 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 C14orf144Q96I85 54 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 NMES1Q9C002 83 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 METTL9Q9H1A3 318 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 FN3KRPQ9HA64 309 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 ELL3Q9HB65 397 aaPredicted RBP12.21□□□□□ -0.45
HMGA1-203ENST00000374116 GPR173Q9NS66 373 aa12.21□□□□□ -0.45
HMGA1-203ENST00000374116 PATE4P0C8F1 98 aa12.21□□□□□ -0.46
HMGA1-203ENST00000374116 TMEM225BP0DP42 221 aa12.21□□□□□ -0.46
HMGA1-203ENST00000374116 PGAM2P15259 253 aa12.21□□□□□ -0.46
HMGA1-203ENST00000374116 RBP2P50120 134 aa12.21□□□□□ -0.46
HMGA1-203ENST00000374116 CYCSP99999 105 aaKnown RBP12.21□□□□□ -0.46
HMGA1-203ENST00000374116 TMEM128Q5BJH2 165 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms