RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 GGCTO75223 188 aaKnown RBP10.13□□□□□ -0.79
VCL-202ENST00000372755 PCMT1P22061 227 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 SEZ6L2Q6UXD5 910 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 NEURL2Q9BR09 285 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 SYNGR1O43759 233 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 AGFG2O95081 481 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 SFTPCP11686 197 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 RPS4XP62701 263 aaKnown RBP10.13□□□□□ -0.79
VCL-202ENST00000372755 DPPA3Q6W0C5 159 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 MRGPRGQ86SM5 289 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 LSMEM1Q8N8F7 131 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 OR5AU1Q8NGC0 362 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 PRR7Q8TB68 274 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 ASB5Q8WWX0 329 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 FRRS1LQ9P0K9 344 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 RPL36A-HNRNPH2H7BZ11 118 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 KLF7O75840 302 aaPredicted RBP10.13□□□□□ -0.79
VCL-202ENST00000372755 CDS2O95674 445 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 APCSP02743 223 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 HOXB3P14651 431 aaPredicted RBP10.13□□□□□ -0.79
VCL-202ENST00000372755 SELENOPP49908 381 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 TSPO2Q5TGU0 170 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 TEPPQ6URK8 271 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 ALG14Q96F25 216 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 LINC00052Q96N35 136 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 ABHD1Q96SE0 405 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 RNF122Q9H9V4 155 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 TMEM38BQ9NVV0 291 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 RGPD1P0DJD0 1748 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 FAM74A7A6NL05 159 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 DRD3P35462 400 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 CD226Q15762 336 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 C1orf174Q8IYL3 243 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 PTPMT1Q8WUK0 201 aaPredicted RBP10.13□□□□□ -0.79
VCL-202ENST00000372755 DLK1P80370 383 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 EWSR1Q01844 656 aaKnown RBP eCLIP10.13□□□□□ -0.79
VCL-202ENST00000372755 GMPPAQ96IJ6 420 aaPredicted RBP10.13□□□□□ -0.79
VCL-202ENST00000372755 ZNF552Q9H707 407 aaPredicted RBP10.13□□□□□ -0.79
VCL-202ENST00000372755 FAM60AQ9NP50 221 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 NEU3Q9UQ49 428 aa10.13□□□□□ -0.79
VCL-202ENST00000372755 PDE4DIPQ5VU43 2346 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 B2MP61769 119 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 ISXQ2M1V0 245 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 OR2I1PQ8NGU4 316 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 ADIPOR1Q96A54 375 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 DIRC2Q96SL1 478 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 RNF224P0DH78 156 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 TMEM255AQ5JRV8 349 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 ZNF441Q8N8Z8 693 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 CRISPLD2Q9H0B8 497 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 FLRT3Q9NZU0 649 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 CLN8Q9UBY8 286 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 HIGD1AQ9Y241 93 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 YBX2Q9Y2T7 364 aaKnown RBP10.12□□□□□ -0.79
VCL-202ENST00000372755 MEOX2P50222 304 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 GAB4Q2WGN9 574 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 MRPL54Q6P161 138 aaKnown RBP10.12□□□□□ -0.79
VCL-202ENST00000372755 RSRP1Q9BUV0 290 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 TREM2Q9NZC2 230 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 OR10J1P30954 320 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 GABRA6Q16445 453 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 C3AR1Q16581 482 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 SIGIRRQ6IA17 410 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 GBGT1Q8N5D6 347 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 FAM222BQ8WU58 562 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 PACRGQ96M98 296 aaPredicted RBP10.12□□□□□ -0.79
VCL-202ENST00000372755 C16orf97H3BN30 126 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 BPIFA4PQ86YQ2 179 aa10.12□□□□□ -0.79
VCL-202ENST00000372755 NRAPQ86VF7 1730 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 CTXND1A0A1B0GTU2 59 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 TMEM218A2RU14 115 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 FFAR1O14842 300 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 HYAL3O43820 417 aaPredicted RBP10.11□□□□□ -0.79
VCL-202ENST00000372755 PAGE4O60829 102 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 C19orf57Q0VDD7 668 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 OR10AC1Q8NH08 325 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 PLCH1Q4KWH8 1693 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 M0R3E3 92 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 ECSCRQ19T08 205 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 TMEM171Q8WVE6 324 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 MRPL24Q96A35 216 aaKnown RBP10.11□□□□□ -0.79
VCL-202ENST00000372755 MBD1Q9UIS9 605 aaPredicted RBP10.11□□□□□ -0.79
VCL-202ENST00000372755 OR51B2Q9Y5P1 312 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 SPANXN1Q5VSR9 72 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 C16orf82Q7Z2V1 217 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 DYRK2Q92630 601 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 COTL1Q14019 142 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 MMDQ15546 238 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 BGLAPP02818 100 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 PPP1CCP36873 323 aaKnown RBP10.11□□□□□ -0.79
VCL-202ENST00000372755 PRSS12P56730 875 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 PSG6Q00889 435 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 BVESQ8NE79 360 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 MRGPRFQ96AM1 343 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 WDR54Q9H977 334 aa10.11□□□□□ -0.79
VCL-202ENST00000372755 TJP1Q07157 1748 aa10.1□□□□□ -0.79
VCL-202ENST00000372755 IGKV3-7A0A075B6H7 116 aa10.1□□□□□ -0.79
VCL-202ENST00000372755 HIST1H1BP16401 226 aaKnown RBP10.1□□□□□ -0.79
VCL-202ENST00000372755 LRRC75BQ2VPJ9 315 aa10.1□□□□□ -0.79
VCL-202ENST00000372755 FBXW9Q5XUX1 488 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms