RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 H3BMH7 237 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 KLK8O60259 260 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 MGAT2Q10469 447 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 ACER2Q5QJU3 275 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 STAC2Q6ZMT1 411 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 CAMKMTQ7Z624 323 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 MUC20Q8N307 709 aaPredicted RBP12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 ROBO4Q8WZ75 1007 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 GSN-AS1Q9NRJ2 163 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 CMC2Q9NRP2 79 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 COA3Q9Y2R0 106 aaPredicted RBP12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 TIMM10BQ9Y5J6 103 aa12.46□□□□□ -0.42
RAPGEF1-202ENST00000372190 A0A096LPE4 126 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 A0A1W2PPZ6 126 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 OR10W1Q8NGF6 305 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 ST6GAL2Q96JF0 529 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 RARRES2Q99969 163 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 TXNIPQ9H3M7 391 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 SYNGR2O43760 224 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 ZNF683Q8IZ20 524 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 C9orf62Q8N4C0 152 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 Q96M85 177 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 HINT3Q9NQE9 182 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 SLC5A6Q9Y289 635 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 A1L4Q6 167 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 PRF1P14222 555 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 C21orf58P58505 322 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 UBE2L3P68036 154 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 CIRBPQ14011 172 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 FCRL6Q6DN72 434 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 BHLHE23Q8NDY6 225 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 EDARADDQ8WWZ3 215 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 OXGR1Q96P68 337 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 OR2V2Q96R30 315 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 MRPL16Q9NX20 251 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 TRGC2P03986 189 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 LGALS3P17931 250 aaKnown RBP12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 COL8A1P27658 744 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 HOXA6P31267 233 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 MPV17LQ2QL34 196 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 MRGPRGQ86SM5 289 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 SLAMF6Q96DU3 332 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 TMEM101Q96IK0 257 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 LINC01387J3KSC0 135 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 SLC37A1P57057 533 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 SLC35B1P78383 322 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 DUSP8Q13202 625 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 SMIM19Q96E16 107 aa12.45□□□□□ -0.42
RAPGEF1-202ENST00000372190 SIRPB1O00241 398 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 FTH1P19P0C7X4 201 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 PDPNQ86YL7 162 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 MARVELD1Q9BSK0 173 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 S1PR5Q9H228 398 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 PARLQ9H300 379 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 TNFRSF12AQ9NP84 129 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 CYSLTR2Q9NS75 346 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 A0A0A6YYD5 115 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 C9orf170A2RU37 121 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 RER1O15258 196 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 LEPROTL1O95214 131 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 CCL4P13236 92 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 ZNF628Q5EBL2 1059 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 ZNF519Q8TB69 540 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 TRAV8-7A0A075B6U6 113 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 MED19A0JLT2 244 aaPredicted RBP12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 UPK1AO00322 258 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 ATP5IP56385 69 aaPredicted RBP12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 WIPI1Q5MNZ9 446 aaPredicted RBP12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 COX14Q96I36 57 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 ASB1Q9Y576 335 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 KIAA1217Q5T5P2 1943 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 C21orf140B9A014 251 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 GNB2P62879 340 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 DHRS2Q13268 280 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 BTLAQ7Z6A9 289 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 MRPL52Q86TS9 123 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 FBXL14Q8N1E6 418 aa12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 METTL1Q9UBP6 276 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 F11RQ9Y624 299 aaKnown RBP12.44□□□□□ -0.42
RAPGEF1-202ENST00000372190 ZNF729A6NN14 1252 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 TMEM33P57088 247 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 LRRC75AQ8NAA5 344 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 OR4C13Q8NGP0 309 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 TMEM56Q96MV1 263 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 WDFY2Q96P53 400 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 CHST6Q9GZX3 395 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 NTNG1Q9Y2I2 539 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 MYO7AQ13402 2215 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 SRSF4Q08170 494 aaKnown RBP12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 GAMTQ14353 236 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 ZNF260Q3ZCT1 412 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 CYSLTR1Q9Y271 337 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 DLEC1Q9Y238 1755 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 A0A1W2PQF6 199 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 MS4A18H0YCH9 400 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 SUMO3P55854 103 aaPredicted RBP12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 EGR3Q06889 387 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 FOXF1Q12946 379 aa12.43□□□□□ -0.42
RAPGEF1-202ENST00000372190 PRSS8Q16651 343 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms