RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ZFYVE26Q68DK2 2539 aa22.04■■□□□ 1.12
ATPAF1-202ENST00000371937 IGHV3OR15-7A0A075B7D8 119 aa22.04■■□□□ 1.12
ATPAF1-202ENST00000371937 TK1P04183 234 aa22.04■■□□□ 1.12
ATPAF1-202ENST00000371937 RCC1P18754 421 aaPredicted RBP22.04■■□□□ 1.12
ATPAF1-202ENST00000371937 FCGR2CP31995 323 aa22.04■■□□□ 1.12
ATPAF1-202ENST00000371937 RBMXP38159 391 aaKnown RBP22.04■■□□□ 1.12
ATPAF1-202ENST00000371937 GABRA2P47869 451 aa22.04■■□□□ 1.12
ATPAF1-202ENST00000371937 OR3A1P47881 315 aa22.04■■□□□ 1.12
ATPAF1-202ENST00000371937 HLA-DRB3P79483 266 aa22.04■■□□□ 1.12
ATPAF1-202ENST00000371937 IGSF11Q5DX21 431 aa22.04■■□□□ 1.12
ATPAF1-202ENST00000371937 MUC1P15941 1255 aaPredicted RBP22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 CD80P33681 288 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 UBE2MP61081 183 aaKnown RBP22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 SEC61A1P61619 476 aaKnown RBP22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 CD83Q01151 205 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 PAX5Q02548 391 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 OR52B4Q8NGK2 314 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 ANGPTL6Q8NI99 470 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 ZNF431Q8TF32 576 aaPredicted RBP22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 MBNL3Q9NUK0 354 aaKnown RBP22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 METRNQ9UJH8 293 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 ZNF222Q9UK12 451 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 PKDREJQ9NTG1 2253 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 ZNF737O75373 536 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 TMEM185AQ8NFB2 350 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 SNX22Q96L94 193 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 SHARPINQ9H0F6 387 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 C5orf66Q9H5L9 145 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 PCDHB10Q9UN67 800 aa22.03■■□□□ 1.12
ATPAF1-202ENST00000371937 DYSFO75923 2080 aa22.02■■□□□ 1.12
ATPAF1-202ENST00000371937 A8MV72 311 aaPredicted RBP22.02■■□□□ 1.12
ATPAF1-202ENST00000371937 TFF1P04155 84 aa22.02■■□□□ 1.12
ATPAF1-202ENST00000371937 SULT1A3P0DMM9 295 aa22.02■■□□□ 1.12
ATPAF1-202ENST00000371937 SULT1A4P0DMN0 295 aa22.02■■□□□ 1.12
ATPAF1-202ENST00000371937 PGAM2P15259 253 aa22.02■■□□□ 1.12
ATPAF1-202ENST00000371937 MUC20Q8N307 709 aaPredicted RBP22.02■■□□□ 1.12
ATPAF1-202ENST00000371937 TMPRSS13Q9BYE2 586 aa22.02■■□□□ 1.12
ATPAF1-202ENST00000371937 LIME1Q9H400 295 aa22.02■■□□□ 1.12
ATPAF1-202ENST00000371937 RANGRFQ9HD47 186 aaPredicted RBP22.02■■□□□ 1.12
ATPAF1-202ENST00000371937 OOEPA6NGQ2 149 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 BET1O15155 118 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 AKR1C4P17516 323 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 AESQ08117 197 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 DHRS2Q13268 280 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 TMEM128Q5BJH2 165 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 FAM201AQ5SY85 155 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 TEX36Q5VZQ5 186 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 OR11H7Q8NGC8 314 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 ZFAND1Q8TCF1 268 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 KCNIP1Q9NZI2 227 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 C14orf166Q9Y224 244 aaKnown RBP22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 IGFBP2P18065 325 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 BAMBIQ13145 260 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 KRBOX4Q5JUW0 171 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 STUMQ69YW2 141 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 ZNF561Q8N587 486 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 ADAD2Q8NCV1 583 aaKnown RBP22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 RTBDNQ9BSG5 229 aaPredicted RBP22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 KIF25Q9UIL4 384 aa22.01■■□□□ 1.11
ATPAF1-202ENST00000371937 DIRAS3O95661 229 aa22■■□□□ 1.11
ATPAF1-202ENST00000371937 HLA-AP01891 365 aaKnown RBP22■■□□□ 1.11
ATPAF1-202ENST00000371937 PPOXP50336 477 aa22■■□□□ 1.11
ATPAF1-202ENST00000371937 HERV-K104P61576 105 aa22■■□□□ 1.11
ATPAF1-202ENST00000371937 HERPUD1Q15011 391 aa22■■□□□ 1.11
ATPAF1-202ENST00000371937 LYG2Q86SG7 212 aa22■■□□□ 1.11
ATPAF1-202ENST00000371937 MOB3AQ96BX8 217 aa22■■□□□ 1.11
ATPAF1-202ENST00000371937 COQ2Q96H96 371 aa22■■□□□ 1.11
ATPAF1-202ENST00000371937 C19orf84I3L1E1 186 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 MGST3O14880 152 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 ZNF728P0DKX0 622 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 NFYAP23511 347 aaPredicted RBP21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 ZBTB25P24278 435 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 PPP1R1AQ13522 171 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 TGIF2LYQ8IUE0 185 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 SPICQ8N5J4 248 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 CCL17Q92583 94 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 SDSLQ96GA7 329 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 CABLES2Q9BTV7 478 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 TMEM106BQ9NUM4 274 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 MEIKINA0A087WXM9 373 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 TRAV38-1A0A0B4J264 116 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 IGKV1-6A0A0C4DH72 117 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 TMEM178BH3BS89 294 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 K7N7A8 449 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 ZNF205O95201 554 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 PPYP01298 95 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 CTSDP07339 412 aaPredicted RBP21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 UCP3P55916 312 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 IL13RA1P78552 427 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 TCTE3Q8IZS6 198 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 OR5D13Q8NGL4 314 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 OR10J5Q8NHC4 309 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 VRK1Q99986 396 aaPredicted RBP21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 CBLN4Q9NTU7 201 aa21.99■■□□□ 1.11
ATPAF1-202ENST00000371937 ARFGEF3Q5TH69 2177 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 ABCA4P78363 2273 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 LGALS8O00214 317 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 C1QL1O75973 258 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 CXCL3P19876 107 aa21.98■■□□□ 1.11
ATPAF1-202ENST00000371937 AADACP22760 399 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms