RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 GLAP06280 429 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 HOXD4P09016 255 aaPredicted RBP10.04□□□□□ -0.8
PDE6C-201ENST00000371447 PET100P0DJ07 73 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 HOXC12P31275 282 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 GUCA2BQ16661 112 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 FAM74A3Q4VXF1 159 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 FAM58AQ8N1B3 248 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 SYT3Q9BQG1 590 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 PCDHB16Q9NRJ7 776 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 OR1A1Q9P1Q5 309 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 TRAPPC2LQ9UL33 140 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 HSF4Q9ULV5 492 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 MRPS18CQ9Y3D5 142 aaKnown RBP10.04□□□□□ -0.8
PDE6C-201ENST00000371447 ATRXP46100 2492 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 ABCD4O14678 606 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 WDR1O75083 606 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 EIF3GO75821 320 aaKnown RBP eCLIP10.04□□□□□ -0.8
PDE6C-201ENST00000371447 IGHV1-2P23083 117 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 SWI5Q1ZZU3 235 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 TBC1D28Q2M2D7 210 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 CXorf66Q5JRM2 361 aaPredicted RBP10.04□□□□□ -0.8
PDE6C-201ENST00000371447 RTL6Q6ICC9 239 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 DPPA2Q7Z7J5 298 aa10.04□□□□□ -0.8
PDE6C-201ENST00000371447 RBMXL1Q96E39 390 aaKnown RBP10.04□□□□□ -0.8
PDE6C-201ENST00000371447 C3orf85A0A1B0GTC6 90 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 KRBOX1C9JBD0 128 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 DTYMKP23919 212 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 PCP4P48539 62 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 RPS16P62249 146 aaKnown RBP10.03□□□□□ -0.8
PDE6C-201ENST00000371447 TMEM187Q14656 261 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 HERPUD1Q15011 391 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 ZNF528Q3MIS6 628 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 LINC00518Q8N0U6 118 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 RNF141Q8WVD5 230 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 LOXL4Q96JB6 756 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 SHARPINQ9H0F6 387 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 SH3BGRL3Q9H299 93 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 DOCK11Q5JSL3 2073 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 RPL36A-HNRNPH2H7BZ11 118 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 MPPED1O15442 326 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 ADAM20O43506 726 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 LPAR6P43657 344 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 FGF12P61328 243 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 PPP1CBP62140 327 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 GNG3P63215 75 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 COLCA1Q6ZS62 124 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 RFESDQ8TAC1 157 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 LINC00470Q9BZP3 86 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 OPN3Q9H1Y3 402 aaPredicted RBP10.03□□□□□ -0.8
PDE6C-201ENST00000371447 TREM2Q9NZC2 230 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 ZNF391Q9UJN7 358 aa10.03□□□□□ -0.8
PDE6C-201ENST00000371447 OR8U9P0C7N5 309 aa10.02□□□□□ -0.8
PDE6C-201ENST00000371447 CD80P33681 288 aa10.02□□□□□ -0.8
PDE6C-201ENST00000371447 MPV17P39210 176 aa10.02□□□□□ -0.8
PDE6C-201ENST00000371447 DHRS11Q6UWP2 260 aa10.02□□□□□ -0.8
PDE6C-201ENST00000371447 LGI3Q8N145 548 aa10.02□□□□□ -0.8
PDE6C-201ENST00000371447 OR8U1Q8NH10 309 aa10.02□□□□□ -0.8
PDE6C-201ENST00000371447 BCL2L2Q92843 193 aaPredicted RBP10.02□□□□□ -0.8
PDE6C-201ENST00000371447 SPSB4Q96A44 273 aa10.02□□□□□ -0.8
PDE6C-201ENST00000371447 COL6A6A6NMZ7 2263 aa10.02□□□□□ -0.8
PDE6C-201ENST00000371447 KALRNO60229 2985 aa10.02□□□□□ -0.8
PDE6C-201ENST00000371447 USF3Q68DE3 2245 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 IGKV1-6A0A0C4DH72 117 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 TOR1AO14656 332 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 PRAMEF6Q5VXH4 476 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 CYB5R2Q6BCY4 276 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 LIAT1Q6ZQX7 453 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 OR5P3Q8WZ94 311 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 FAM117AQ9C073 453 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 ZGRF1Q86YA3 2104 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 ZNF724A8MTY0 619 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 TRIM77I1YAP6 450 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 WRBO00258 174 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 TUSC2O75896 110 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 TGFBR3Q03167 851 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 SRSF4Q08170 494 aaKnown RBP10.02□□□□□ -0.81
PDE6C-201ENST00000371447 Q6ZRG5 221 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 CBLN2Q8IUK8 224 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 ZNF808Q8N4W9 903 aaPredicted RBP10.02□□□□□ -0.81
PDE6C-201ENST00000371447 C9orf106Q8NAJ2 232 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 OR10Z1Q8NGY1 313 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 ASB13Q8WXK3 278 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 NANOS1Q8WY41 292 aaKnown RBP10.02□□□□□ -0.81
PDE6C-201ENST00000371447 MOB3AQ96BX8 217 aa10.02□□□□□ -0.81
PDE6C-201ENST00000371447 BARX1Q9HBU1 254 aaPredicted RBP10.02□□□□□ -0.81
PDE6C-201ENST00000371447 TNRC6AQ8NDV7 1962 aaKnown RBP10.01□□□□□ -0.81
PDE6C-201ENST00000371447 TRAV24A0A0B4J272 114 aa10.01□□□□□ -0.81
PDE6C-201ENST00000371447 CEACAM18A8MTB9 384 aa10.01□□□□□ -0.81
PDE6C-201ENST00000371447 DEFB108AA8MXU0 73 aa10.01□□□□□ -0.81
PDE6C-201ENST00000371447 PRSS44E7EML9 344 aa10.01□□□□□ -0.81
PDE6C-201ENST00000371447 SURF2Q15527 256 aaPredicted RBP10.01□□□□□ -0.81
PDE6C-201ENST00000371447 HSD17B13Q7Z5P4 300 aaPredicted RBP10.01□□□□□ -0.81
PDE6C-201ENST00000371447 ZNF573Q86YE8 665 aa10.01□□□□□ -0.81
PDE6C-201ENST00000371447 RPRMLQ8N4K4 120 aa10.01□□□□□ -0.81
PDE6C-201ENST00000371447 CCDC54Q8NEL0 328 aa10.01□□□□□ -0.81
PDE6C-201ENST00000371447 OR10J5Q8NHC4 309 aa10.01□□□□□ -0.81
PDE6C-201ENST00000371447 ARL11Q969Q4 196 aa10.01□□□□□ -0.81
PDE6C-201ENST00000371447 C20orf24Q9BUV8 137 aa10.01□□□□□ -0.81
PDE6C-201ENST00000371447 TUBAL3A6NHL2 446 aa10.01□□□□□ -0.81
PDE6C-201ENST00000371447 DEDDO75618 318 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms