RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 OR2H2O95918 312 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 LIPFP07098 398 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 UBBP0CG47 229 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 GTF2F2P13984 249 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 ZNF44P15621 663 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 GABRR1P24046 479 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 SLC6A1P30531 599 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 GDNFP39905 211 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 IL13RA2Q14627 380 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 PIGYQ3MUY2 71 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 NHLRC3Q5JS37 347 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 FAM120AOSQ5T036 256 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 AKAP14Q86UN6 197 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 DRAXINQ8NBI3 349 aaPredicted RBP13.17□□□□□ -0.3
PFDN4-201ENST00000371419 MRPS24Q96EL2 167 aaKnown RBP13.17□□□□□ -0.3
PFDN4-201ENST00000371419 SNX22Q96L94 193 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 C1orf147Q96MC9 270 aaPredicted RBP13.17□□□□□ -0.3
PFDN4-201ENST00000371419 DCTN5Q9BTE1 182 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 TMPRSS13Q9BYE2 586 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 ATG5Q9H1Y0 275 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 C7orf69Q9H7B7 122 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 ST3GAL6Q9Y274 331 aa13.17□□□□□ -0.3
PFDN4-201ENST00000371419 RBMX2Q9Y388 322 aaKnown RBP13.17□□□□□ -0.3
PFDN4-201ENST00000371419 NIPBLQ6KC79 2804 aaeCLIP13.17□□□□□ -0.3
PFDN4-201ENST00000371419 ANK3Q12955 4377 aaKnown RBP13.17□□□□□ -0.3
PFDN4-201ENST00000371419 A0A1W2PP11 408 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 TMEM82A0PJX8 343 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 METTL21EPA6NDL7 271 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 SIRPB1O00241 398 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 DEGS1O15121 323 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 LDLRAD4O15165 306 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 HNF1AP20823 631 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 LMO1P25800 156 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 RBM11P57052 281 aaKnown RBP13.16□□□□□ -0.3
PFDN4-201ENST00000371419 SSBP1Q04837 148 aaKnown RBP13.16□□□□□ -0.3
PFDN4-201ENST00000371419 PAX8Q06710 450 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 KLF9Q13886 244 aaPredicted RBP13.16□□□□□ -0.3
PFDN4-201ENST00000371419 FAM189A2Q15884 450 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 RNASE12Q5GAN4 147 aaKnown RBP13.16□□□□□ -0.3
PFDN4-201ENST00000371419 RAB12Q6IQ22 244 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 Q6P435 159 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 C17orf107Q6ZR85 190 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 CHST4Q8NCG5 386 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 OR5D13Q8NGL4 314 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 OR52I2Q8NH67 350 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 PPP1R35Q8TAP8 253 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 SHARPINQ9H0F6 387 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 TAS2R8Q9NYW2 309 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 FBLN5Q9UBX5 448 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 RAB22AQ9UL26 194 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 SETD2Q9BYW2 2564 aaPredicted RBP13.16□□□□□ -0.3
PFDN4-201ENST00000371419 TRBV23-1A0A0A0MS06 115 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 SULT1C2O00338 296 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 PSPNO60542 156 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 CRTAPO75718 401 aaPredicted RBP13.16□□□□□ -0.3
PFDN4-201ENST00000371419 HLA-DMAP28067 261 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 PLA1AQ53H76 456 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 LINC00596Q86U02 117 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 LY6G5BQ8NDX9 201 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 C8orf46Q8TAG6 207 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 DMRTB1Q96MA1 342 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 CST11Q9H112 138 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 AUNIPQ9H7T9 357 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 LPAR3Q9UBY5 353 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 CDC42EP3Q9UKI2 254 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 NUBP2Q9Y5Y2 271 aa13.16□□□□□ -0.3
PFDN4-201ENST00000371419 TRAV18A0A075B6X5 111 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 HMX3A6NHT5 357 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 INMT-MINDY4F8WBC2 141 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 BOLA2-SMG1P6H3BVE0 249 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 SLC33A1O00400 549 aaPredicted RBP13.15□□□□□ -0.3
PFDN4-201ENST00000371419 RBBP9O75884 186 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 PPIAL4GP0DN37 164 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 MGMTP16455 207 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 EFNB2P52799 333 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 PDCD1Q15116 288 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 GRK1Q15835 563 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 OR2W3Q7Z3T1 314 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 TEX29Q8N6K0 151 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 TMEM104Q8NE00 496 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 BEX2Q9BXY8 128 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 CHST6Q9GZX3 395 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 BANF2Q9H503 90 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 SCPEP1Q9HB40 452 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 OPN4Q9UHM6 478 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 AUP1Q9Y679 476 aa13.15□□□□□ -0.3
PFDN4-201ENST00000371419 ANKRD20A5PA0PJZ0 165 aa13.14□□□□□ -0.31
PFDN4-201ENST00000371419 MGST3O14880 152 aa13.14□□□□□ -0.31
PFDN4-201ENST00000371419 GEMIN2O14893 280 aaKnown RBP13.14□□□□□ -0.31
PFDN4-201ENST00000371419 OR7C1O76099 320 aaPredicted RBP13.14□□□□□ -0.31
PFDN4-201ENST00000371419 DHFRP00374 187 aa13.14□□□□□ -0.31
PFDN4-201ENST00000371419 AVPP01185 164 aa13.14□□□□□ -0.31
PFDN4-201ENST00000371419 VSIG8P0DPA2 414 aa13.14□□□□□ -0.31
PFDN4-201ENST00000371419 PRSS3P35030 304 aa13.14□□□□□ -0.31
PFDN4-201ENST00000371419 FAUP35544 74 aaKnown RBP13.14□□□□□ -0.31
PFDN4-201ENST00000371419 OR3A1P47881 315 aa13.14□□□□□ -0.31
PFDN4-201ENST00000371419 RAG2P55895 527 aa13.14□□□□□ -0.31
PFDN4-201ENST00000371419 RPL31P62899 125 aaKnown RBP13.14□□□□□ -0.31
PFDN4-201ENST00000371419 PLA2G7Q13093 441 aa13.14□□□□□ -0.31
PFDN4-201ENST00000371419 MPV17LQ2QL34 196 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms