RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 CARHSP1Q9Y2V2 147 aaKnown RBP24.65■■□□□ 1.54
SSBP3-204ENST00000371320 FAM96BQ9Y3D0 163 aa24.65■■□□□ 1.54
SSBP3-204ENST00000371320 A0A1W2PR80 420 aa24.65■■□□□ 1.54
SSBP3-204ENST00000371320 J3QW42 95 aa24.65■■□□□ 1.54
SSBP3-204ENST00000371320 SWI5Q1ZZU3 235 aa24.65■■□□□ 1.54
SSBP3-204ENST00000371320 CMTM1Q8IZ96 169 aa24.65■■□□□ 1.54
SSBP3-204ENST00000371320 GPHA2Q96T91 129 aa24.65■■□□□ 1.54
SSBP3-204ENST00000371320 SPIN2AQ99865 258 aa24.65■■□□□ 1.54
SSBP3-204ENST00000371320 SPIN2BQ9BPZ2 258 aa24.65■■□□□ 1.54
SSBP3-204ENST00000371320 GLRX2Q9NS18 164 aa24.65■■□□□ 1.54
SSBP3-204ENST00000371320 FAM212BQ9NTI7 297 aaPredicted RBP24.65■■□□□ 1.54
SSBP3-204ENST00000371320 DEGS1O15121 323 aa24.64■■□□□ 1.53
SSBP3-204ENST00000371320 ZNF44P15621 663 aa24.64■■□□□ 1.53
SSBP3-204ENST00000371320 MUC1P15941 1255 aaPredicted RBP24.64■■□□□ 1.53
SSBP3-204ENST00000371320 Q6ZRG5 221 aa24.64■■□□□ 1.53
SSBP3-204ENST00000371320 GCNT2Q8N0V5 402 aa24.64■■□□□ 1.53
SSBP3-204ENST00000371320 TLNRD1Q9H1K6 362 aa24.64■■□□□ 1.53
SSBP3-204ENST00000371320 CDH20Q9HBT6 801 aa24.64■■□□□ 1.53
SSBP3-204ENST00000371320 CDRT15L2A8MXV6 281 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 TRIM77I1YAP6 450 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 SMPD2O60906 423 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 IGHV1-2P23083 117 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 IDH3GP51553 393 aaPredicted RBP24.63■■□□□ 1.53
SSBP3-204ENST00000371320 F2RL1P55085 397 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 PPP1CBP62140 327 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 PCSK4Q6UW60 755 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 WNT2BQ93097 391 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 OR2J1Q9GZK6 312 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 IFT22Q9H7X7 185 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 NHLH2Q02577 135 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 SEC11CQ9BY50 192 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 CLCF1Q9UBD9 225 aa24.63■■□□□ 1.53
SSBP3-204ENST00000371320 NKX2-1P43699 371 aaPredicted RBP24.62■■□□□ 1.53
SSBP3-204ENST00000371320 SRSF6Q13247 344 aaKnown RBP24.62■■□□□ 1.53
SSBP3-204ENST00000371320 ZNF880Q6PDB4 577 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 SPAG16Q8N0X2 631 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 DEFB124Q8NES8 71 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 OR10J5Q8NHC4 309 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 LYZL6O75951 148 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 SEC11BP0C7V7 166 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 HLA-DRB3P79483 266 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 SUMF1Q8NBK3 374 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 FDCSPQ8NFU4 85 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 TRIB1Q96RU8 372 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 NRIP2Q9BQI9 281 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 GINS3Q9BRX5 216 aa24.62■■□□□ 1.53
SSBP3-204ENST00000371320 LRP5LA4QPB2 252 aa24.61■■□□□ 1.53
SSBP3-204ENST00000371320 RNASEK-C17orf49H0YIS7 233 aa24.61■■□□□ 1.53
SSBP3-204ENST00000371320 AGPAT2O15120 278 aa24.61■■□□□ 1.53
SSBP3-204ENST00000371320 IGHG3P01860 377 aa24.61■■□□□ 1.53
SSBP3-204ENST00000371320 UCP1P25874 307 aa24.61■■□□□ 1.53
SSBP3-204ENST00000371320 Q6P435 159 aa24.61■■□□□ 1.53
SSBP3-204ENST00000371320 LILRB1Q8NHL6 650 aaPredicted RBP24.61■■□□□ 1.53
SSBP3-204ENST00000371320 KIRREL1Q96J84 757 aa24.61■■□□□ 1.53
SSBP3-204ENST00000371320 TTC28Q96AY4 2481 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 DUXBA0A1W2PPF3 345 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 ADAM20O43506 726 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 ID4P47928 161 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 WDR86Q86TI4 376 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 BOD1Q96IK1 185 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 FTH1P19P0C7X4 201 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 PVALBP20472 110 aaPredicted RBP24.6■■□□□ 1.53
SSBP3-204ENST00000371320 ERVS71-1P61550 626 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 FAM76BQ5HYJ3 339 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 ZNF324BQ6AW86 544 aaPredicted RBP24.6■■□□□ 1.53
SSBP3-204ENST00000371320 FAM214BQ7L5A3 538 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 OR2C3Q8N628 320 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 SCCPDHQ8NBX0 429 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 PARP12Q9H0J9 701 aaKnown RBP24.6■■□□□ 1.53
SSBP3-204ENST00000371320 OR2W1Q9Y3N9 320 aa24.6■■□□□ 1.53
SSBP3-204ENST00000371320 TNFSF12O43508 249 aa24.59■■□□□ 1.53
SSBP3-204ENST00000371320 PGLYRP1O75594 196 aaPredicted RBP24.59■■□□□ 1.53
SSBP3-204ENST00000371320 S100GP29377 79 aa24.59■■□□□ 1.53
SSBP3-204ENST00000371320 POLR2GP62487 172 aaKnown RBP eCLIP24.59■■□□□ 1.53
SSBP3-204ENST00000371320 EWSR1Q01844 656 aaKnown RBP eCLIP24.59■■□□□ 1.532e-6■■■□□ 18.8
SSBP3-204ENST00000371320 MED12LQ86YW9 2145 aa24.59■■□□□ 1.53
SSBP3-204ENST00000371320 ADAT1Q9BUB4 502 aaKnown RBP24.59■■□□□ 1.53
SSBP3-204ENST00000371320 C11orf1Q9H5F2 150 aa24.59■■□□□ 1.53
SSBP3-204ENST00000371320 POLDIP2Q9Y2S7 368 aa24.59■■□□□ 1.53
SSBP3-204ENST00000371320 URB1O60287 2271 aaKnown RBP24.59■■□□□ 1.53
SSBP3-204ENST00000371320 SPAARA0A1B0GVQ0 90 aa24.58■■□□□ 1.53
SSBP3-204ENST00000371320 H0Y980 276 aa24.58■■□□□ 1.53
SSBP3-204ENST00000371320 SPP1P10451 314 aa24.58■■□□□ 1.53
SSBP3-204ENST00000371320 Q8IYB0 196 aa24.58■■□□□ 1.53
SSBP3-204ENST00000371320 CLRN3Q8NCR9 226 aa24.58■■□□□ 1.53
SSBP3-204ENST00000371320 DANCRP0C864 163 aa24.58■■□□□ 1.53
SSBP3-204ENST00000371320 VDAC1P21796 283 aa24.58■■□□□ 1.53
SSBP3-204ENST00000371320 H1FOOQ8IZA3 346 aaPredicted RBP24.58■■□□□ 1.53
SSBP3-204ENST00000371320 OR5D13Q8NGL4 314 aa24.58■■□□□ 1.53
SSBP3-204ENST00000371320 LYPD6BQ8NI32 183 aa24.58■■□□□ 1.53
SSBP3-204ENST00000371320 CABLES2Q9BTV7 478 aa24.58■■□□□ 1.53
SSBP3-204ENST00000371320 PURGQ9UJV8 347 aaKnown RBP24.58■■□□□ 1.53
SSBP3-204ENST00000371320 TOR1AO14656 332 aa24.57■■□□□ 1.52
SSBP3-204ENST00000371320 SNAPINO95295 136 aa24.57■■□□□ 1.52
SSBP3-204ENST00000371320 OR8U9P0C7N5 309 aa24.57■■□□□ 1.52
SSBP3-204ENST00000371320 GABRA6Q16445 453 aa24.57■■□□□ 1.52
SSBP3-204ENST00000371320 NMSQ5H8A3 153 aa24.57■■□□□ 1.52
SSBP3-204ENST00000371320 Q6ZT83 130 aa24.57■■□□□ 1.52
SSBP3-204ENST00000371320 OR8U1Q8NH10 309 aa24.57■■□□□ 1.52
SSBP3-204ENST00000371320 SLC25A40Q8TBP6 338 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms