RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 DMRTA1Q5VZB9 504 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 TBC1D26Q86UD7 250 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 TGIF2LYQ8IUE0 185 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 TMEM37Q8WXS4 190 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 DEFB118Q96PH6 123 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 NKX2-4Q9H2Z4 354 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 PPIAL4AQ9Y536 164 aa10.03□□□□□ -0.8
SMARCA1-201ENST00000371121 BLACEA4D250 179 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 H3BP45 60 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 DHRS3O75911 302 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 DTYMKP23919 212 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 OTX1P32242 354 aaPredicted RBP10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 KCNMB1Q16558 191 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 THEM4Q5T1C6 240 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 TPTE2P1Q5T6R2 138 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 LCN15Q6UWW0 184 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 ACY3Q96HD9 319 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 LRFN1Q9P244 771 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 CFAP47Q6ZTR5 3102 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 SPAG17Q6Q759 2223 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 TGOLN2O43493 480 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 NDUFB8O95169 186 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 LINC00614P0C842 121 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 GCH1P30793 250 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 RPL29P47914 159 aaKnown RBP10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 MYBPHQ13203 477 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 GNMTQ14749 295 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 CARD17Q5XLA6 110 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 DPPA3Q6W0C5 159 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 Q6ZWC4 215 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 MYPOPQ86VE0 399 aaPredicted RBP10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 OR2V1Q8NHB1 315 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 FGF14Q92915 247 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 NABP1Q96AH0 204 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 GPR35Q9HC97 309 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 Q9N2K0 584 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 PIGLQ9Y2B2 252 aa10.02□□□□□ -0.81
SMARCA1-201ENST00000371121 TNFRSF10CO14798 259 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 PPYP01298 95 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 WNT2P09544 360 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 MSX1P28360 303 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 TFPI2P48307 235 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 GFERP55789 205 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 FBXW4P57775 412 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 HHEXQ03014 270 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 TLE4Q04727 773 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 ENDOGQ14249 297 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 ARL6IP1Q15041 203 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 ABCA11PQ4W5N1 156 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 Q6ZSR6 202 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 CTDSP1Q9GZU7 261 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 AURKAIP1Q9NWT8 199 aaPredicted RBP10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 GGCTO75223 188 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 CNOT4O95628 575 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 HPRT1P00492 218 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 TYMSP04818 313 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 MTCP1P56278 107 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 TMEM267Q0VDI3 215 aaPredicted RBP10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 EIF3IQ13347 325 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 C1orf61Q13536 156 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 ASCL4Q6XD76 172 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 RTL10Q7L3V2 364 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 RNASE8Q8TDE3 154 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 HS3ST6Q96QI5 342 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 GABRG3Q99928 467 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 OR6C3Q9NZP0 311 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 IGKV1-6A0A0C4DH72 117 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 CRYABP02511 175 aaKnown RBP10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 POU2F2P09086 479 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 CDKN1AP38936 164 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 CYP2G1PQ6ZSU1 146 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 FAM185AQ8N0U4 392 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 IL22RA1Q8N6P7 574 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 GNPNAT1Q96EK6 184 aaPredicted RBP10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 SLC7A10Q9NS82 523 aa10.01□□□□□ -0.81
SMARCA1-201ENST00000371121 LCATP04180 440 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 ZNF787Q6DD87 383 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 OOSP2Q86WS3 158 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 RPP25LQ8N5L8 163 aaKnown RBP10□□□□□ -0.81
SMARCA1-201ENST00000371121 Q8N976 141 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 A0A0U1RQV5 110 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 OR2J2O76002 312 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 RPLP1P05386 114 aaKnown RBP10□□□□□ -0.81
SMARCA1-201ENST00000371121 GALR1P47211 349 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 GNG10P50151 68 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 ZNF133P52736 654 aaPredicted RBP10□□□□□ -0.81
SMARCA1-201ENST00000371121 C1orf53Q5VUE5 145 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 OR2AE1Q8NHA4 323 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 FKBP11Q9NYL4 201 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 GTF3C1Q12789 2109 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 PTGDSP41222 190 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 TMEM144Q7Z5S9 345 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 UEVLDQ8IX04 471 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 ZNF248Q8NDW4 579 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 ZNF837Q96EG3 531 aaPredicted RBP10□□□□□ -0.81
SMARCA1-201ENST00000371121 P2RX4Q99571 388 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 ELL3Q9HB65 397 aaPredicted RBP10□□□□□ -0.81
SMARCA1-201ENST00000371121 NAGKQ9UJ70 344 aa10□□□□□ -0.81
SMARCA1-201ENST00000371121 ANKUB1A6NFN9 424 aa9.99□□□□□ -0.81
SMARCA1-201ENST00000371121 BAXQ07812 192 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms