RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 ZNF497Q6ZNH5 498 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 SETD6Q8TBK2 473 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 LURAP1Q96LR2 239 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 FAM234AQ9H0X4 552 aa9.1□□□□□ -0.95
BRCC3-204ENST00000369462 RBMX2Q9Y388 322 aaKnown RBP9.1□□□□□ -0.95
BRCC3-204ENST00000369462 MEIKINA0A087WXM9 373 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 FCN3O75636 299 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 MT-ND4P03905 459 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 FCGR3AP08637 254 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 INPP1P49441 399 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 LRRC10Q5BKY1 277 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 OR52W1Q6IF63 320 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 Q6ZPA2 131 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 MRPL30Q8TCC3 161 aaKnown RBP9.09□□□□□ -0.95
BRCC3-204ENST00000369462 C10orf105Q8TEF2 133 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 PIMREGQ9BSJ6 248 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 RIMS4Q9H426 269 aaPredicted RBP9.09□□□□□ -0.95
BRCC3-204ENST00000369462 MIOXQ9UGB7 285 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 TMEM30CPA0ZSE6 113 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 RCC1P18754 421 aaPredicted RBP9.09□□□□□ -0.95
BRCC3-204ENST00000369462 CBX5P45973 191 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 ACTBP60709 375 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 ACTG1P63261 375 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 STEAP3Q658P3 488 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 ZNF57Q68EA5 555 aaPredicted RBP9.09□□□□□ -0.95
BRCC3-204ENST00000369462 NLRC3Q7RTR2 1065 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 TRAPPC2LQ9UL33 140 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 DOCK11Q5JSL3 2073 aa9.09□□□□□ -0.95
BRCC3-204ENST00000369462 IGHV4-30-2A0A087WSY4 118 aa9.09□□□□□ -0.96
BRCC3-204ENST00000369462 NDUFS8O00217 210 aa9.09□□□□□ -0.96
BRCC3-204ENST00000369462 WNT2P09544 360 aa9.09□□□□□ -0.96
BRCC3-204ENST00000369462 DTYMKP23919 212 aa9.09□□□□□ -0.96
BRCC3-204ENST00000369462 HLA-DMAP28067 261 aa9.09□□□□□ -0.96
BRCC3-204ENST00000369462 DCTN2Q13561 401 aaKnown RBP9.09□□□□□ -0.96
BRCC3-204ENST00000369462 CLEC12BQ2HXU8 276 aa9.09□□□□□ -0.96
BRCC3-204ENST00000369462 SLC35E4Q6ICL7 350 aa9.09□□□□□ -0.96
BRCC3-204ENST00000369462 GAPTQ8N292 157 aa9.09□□□□□ -0.96
BRCC3-204ENST00000369462 TOMM5Q8N4H5 51 aa9.09□□□□□ -0.96
BRCC3-204ENST00000369462 BEST4Q8NFU0 473 aa9.09□□□□□ -0.96
BRCC3-204ENST00000369462 PDZD2O15018 2839 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 IGKV1D-8A0A087WSZ0 117 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 ODAMA1E959 279 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 H7C1Q1 480 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 P2RX3P56373 397 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 SEC61A1P61619 476 aaKnown RBP9.08□□□□□ -0.96
BRCC3-204ENST00000369462 ZNF841Q6ZN19 808 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 OR8B3Q8NGG8 313 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 H1FXQ92522 213 aaKnown RBP9.08□□□□□ -0.96
BRCC3-204ENST00000369462 SNAPC3Q92966 411 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 NEIL1Q96FI4 390 aaPredicted RBP9.08□□□□□ -0.96
BRCC3-204ENST00000369462 OR8B2Q96RD0 313 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 DCTN5Q9BTE1 182 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 PATZ1Q9HBE1 687 aaKnown RBP9.08□□□□□ -0.96
BRCC3-204ENST00000369462 BAHCC1Q9P281 2608 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 RCVRNP35243 200 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 DSCR9P59020 149 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 PAX5Q02548 391 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 SSBP1Q04837 148 aaKnown RBP9.08□□□□□ -0.96
BRCC3-204ENST00000369462 C5orf24Q7Z6I8 188 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 HOGA1Q86XE5 327 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 LYSMD2Q8IV50 215 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 NINJ1Q92982 152 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 MBD6Q96DN6 1003 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 OCEL1Q9H607 264 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 Q9N2K0 584 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 CLN8Q9UBY8 286 aa9.08□□□□□ -0.96
BRCC3-204ENST00000369462 PHF1O43189 567 aaPredicted RBP9.07□□□□□ -0.96
BRCC3-204ENST00000369462 CD3DP04234 171 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 RPL31P62899 125 aaKnown RBP9.07□□□□□ -0.96
BRCC3-204ENST00000369462 LRRC75A-AS1Q8N1F1 130 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 PRR18Q8N4B5 295 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 CLDND2Q8NHS1 167 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 MRGPRDQ8TDS7 321 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 TAS2R8Q9NYW2 309 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 TRBV6-6A0A0A6YYG2 114 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 ANKRD20A5PA0PJZ0 165 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 FUOMA2VDF0 154 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 ZNF736B4DX44 427 aaPredicted RBP9.07□□□□□ -0.96
BRCC3-204ENST00000369462 CSF1P09603 554 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 GSTT2BP0CG30 244 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 ERP29P30040 261 aaKnown RBP9.07□□□□□ -0.96
BRCC3-204ENST00000369462 GLP1RP43220 463 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 WDR25Q64LD2 544 aaPredicted RBP9.07□□□□□ -0.96
BRCC3-204ENST00000369462 ZNF565Q8N9K5 539 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 OR13A1Q8NGR1 328 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 UBALD1Q8TB05 177 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 ZNF286AQ9HBT8 521 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 ANAPC10Q9UM13 185 aa9.07□□□□□ -0.96
BRCC3-204ENST00000369462 PRRC2AP48634 2157 aaKnown RBP9.06□□□□□ -0.96
BRCC3-204ENST00000369462 IGHV4-61A0A0C4DH41 118 aa9.06□□□□□ -0.96
BRCC3-204ENST00000369462 VWC2LB2RUY7 222 aa9.06□□□□□ -0.96
BRCC3-204ENST00000369462 NAT1P18440 290 aa9.06□□□□□ -0.96
BRCC3-204ENST00000369462 RFX2P48378 723 aa9.06□□□□□ -0.96
BRCC3-204ENST00000369462 AP3S2P59780 193 aa9.06□□□□□ -0.96
BRCC3-204ENST00000369462 GNB2P62879 340 aa9.06□□□□□ -0.96
BRCC3-204ENST00000369462 KLF9Q13886 244 aaPredicted RBP9.06□□□□□ -0.96
BRCC3-204ENST00000369462 FAAP20Q6NZ36 180 aa9.06□□□□□ -0.96
BRCC3-204ENST00000369462 ZNF880Q6PDB4 577 aa9.06□□□□□ -0.96
BRCC3-204ENST00000369462 C19orf12Q9NSK7 152 aa9.06□□□□□ -0.96
BRCC3-204ENST00000369462 MBNL3Q9NUK0 354 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms