RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 CELF2-AS1Q8N7Q2 184 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 NFAM1Q8NET5 270 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 SNRNP40Q96DI7 357 aaKnown RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 DNAJC13O75165 2243 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 CDK2AP1O14519 115 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 METTL15P1P0C7V9 234 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 CCDC190Q86UF4 302 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 BLNKQ8WV28 456 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 BTF3L4Q96K17 158 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 CHRDL1Q9BU40 450 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 ABHD14AQ9BUJ0 271 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 GAR1Q9NY12 217 aaKnown RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 MIA3Q5JRA6 1907 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 LCN2P80188 198 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 GCSAMQ8N6F7 178 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 MARS2Q96GW9 593 aaKnown RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 EP300Q09472 2414 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 GIPP09681 153 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 HTR1DP28221 377 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 MMP16P51512 607 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 ZNF787Q6DD87 383 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 ZNF486Q96H40 463 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 OR4C12Q96R67 309 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 JMJD8Q96S16 334 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 ATP5SQ99766 215 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 ASCL3Q9NQ33 180 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 ZNF629Q9UEG4 869 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 PRNDQ9UKY0 176 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 F5H697 171 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 RAB29O14966 203 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 SYNGR1O43759 233 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 OR13C7P0DN81 318 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 PTHLHP12272 177 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 PPP1CCP36873 323 aaKnown RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 PCSK4Q6UW60 755 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 HIST2H3AQ71DI3 136 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 DRAXINQ8NBI3 349 aaPredicted RBP9.32□□□□□ -0.92
PTPRK-205ENST00000368213 OR1L4Q8NGR5 311 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 TVP23CQ96ET8 276 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 SNX22Q96L94 193 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 LINC00052Q96N35 136 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 RAB18Q9NP72 206 aa9.32□□□□□ -0.92
PTPRK-205ENST00000368213 GREB1LQ9C091 1923 aaPredicted RBP9.31□□□□□ -0.92
PTPRK-205ENST00000368213 DBX1A6NMT0 343 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 ID1P41134 155 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 TMUB2Q71RG4 321 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 TMEM123Q8N131 208 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 PFDN5Q99471 154 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 PATZ1Q9HBE1 687 aaKnown RBP9.31□□□□□ -0.92
PTPRK-205ENST00000368213 OTOFQ9HC10 1997 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 SLC25A5P05141 298 aaKnown RBP9.31□□□□□ -0.92
PTPRK-205ENST00000368213 ZNF708P17019 499 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 MMP15P51511 669 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 CTHRC1Q96CG8 243 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 YIPF6Q96EC8 236 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 KCNK15Q9H427 330 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 NAA60Q9H7X0 242 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 SMLR1H3BR10 107 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 SOCS1O15524 211 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 MPV17P39210 176 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 SCAND1P57086 179 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 SLC38A11Q08AI6 406 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 PXDC1Q5TGL8 231 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 LYSMD2Q8IV50 215 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 C9orf106Q8NAJ2 232 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 RAB40CQ96S21 281 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 GON7Q9BXV9 100 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 RASL12Q9NYN1 266 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 A0A0U1RQV5 110 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 LALBAP00709 142 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 GALP22466 123 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 ZNF273Q14593 569 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 HMGN3Q15651 99 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 OR5M8Q8NGP6 311 aa9.31□□□□□ -0.92
PTPRK-205ENST00000368213 H0Y8G0 127 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 RPL36A-HNRNPH2H7BZ11 118 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 GLRXP35754 106 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 CD200P41217 278 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 ANXA10Q9UJ72 324 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 CACNA1EQ15878 2313 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 TRBV5-3A0A0A0MS03 114 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 ZNF716A6NP11 495 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 HAGHQ16775 308 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 ZNF439Q8NDP4 499 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 WDYHV1Q96HA8 205 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 ZMIZ1Q9ULJ6 1067 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 PTP4A3O75365 173 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 COX5BP10606 129 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 NQO2P16083 231 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 ASAH1Q13510 395 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 DMKNQ6E0U4 476 aaPredicted RBP9.3□□□□□ -0.92
PTPRK-205ENST00000368213 UNQ5815/PRO19632Q6UWF5 114 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 TBC1D26Q86UD7 250 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 ZNF485Q8NCK3 441 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 OR4A4PQ8NGN8 299 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 OR1L8Q8NGR8 309 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 ADAT3Q96EY9 351 aaPredicted RBP9.3□□□□□ -0.92
PTPRK-205ENST00000368213 C7orf69Q9H7B7 122 aa9.3□□□□□ -0.92
PTPRK-205ENST00000368213 SPTBN2O15020 2390 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms