RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 ZNF729A6NN14 1252 aaPredicted RBP9.92□□□□□ -0.82
USF1-201ENST00000368019 AGPAT2O15120 278 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 HSPA12AO43301 675 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 CLN5O75503 358 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 HBE1P02100 147 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 FCGR2AP12318 317 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 SFTPDP35247 375 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 HTR5AP47898 357 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 RND3P61587 244 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 RBPJQ06330 500 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 ZNF616Q08AN1 781 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 ENDOGQ14249 297 aaKnown RBP9.92□□□□□ -0.82
USF1-201ENST00000368019 GNMTQ14749 295 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 CDSNQ15517 529 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 UBE2V2Q15819 145 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 FBXW12Q6X9E4 464 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 RBMS3Q6XE24 437 aaKnown RBP9.92□□□□□ -0.82
USF1-201ENST00000368019 LHFPL2Q6ZUX7 228 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 TMEM156Q8N614 296 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 M1APQ8TC57 530 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 RTN4IP1Q8WWV3 396 aaPredicted RBP9.92□□□□□ -0.82
USF1-201ENST00000368019 SPTSSAQ969W0 71 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 MUCL1Q96DR8 90 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 PIGQQ9BRB3 760 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 SOX7Q9BT81 388 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 RSRP1Q9BUV0 290 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 EIF5A2Q9GZV4 153 aaKnown RBP9.92□□□□□ -0.82
USF1-201ENST00000368019 SLC25A31Q9H0C2 315 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 ZNF286AQ9HBT8 521 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 WFDC1Q9HC57 220 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 MIOXQ9UGB7 285 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 MTORP42345 2549 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 SPG11Q96JI7 2443 aa9.92□□□□□ -0.82
USF1-201ENST00000368019 INTS1Q8N201 2190 aaKnown RBP9.91□□□□□ -0.82
USF1-201ENST00000368019 HCFC1P51610 2035 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 ELOA3CA0A087WX78 387 aaPredicted RBP9.91□□□□□ -0.82
USF1-201ENST00000368019 A0A1W2PPE3 182 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A10PA6NDY2 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A18PA6NE21 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A16PA6NEW6 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A20PA6NIJ5 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A8PA6NJQ4 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A7PA6NKC0 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A22PA8MWA6 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A12PA8MX19 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A5PA8MXJ8 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A23PA8MXZ1 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 B4DEV8 164 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 ZNF732B4DXR9 585 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 H3BML4 177 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 DNPH1O43598 174 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 NME2P1O60361 137 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 NDUFS6O75380 124 aaKnown RBP9.91□□□□□ -0.82
USF1-201ENST00000368019 ZFAND5O76080 213 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 HSPB1P04792 205 aaKnown RBP9.91□□□□□ -0.82
USF1-201ENST00000368019 OR5AC1P0C628 307 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A15PP0C7V4 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A13PP0C7W8 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A14PP0C7W9 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 FAM90A24PP0C7X0 464 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 TMEM225BP0DP42 221 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 CDX1P47902 265 aaPredicted RBP9.91□□□□□ -0.82
USF1-201ENST00000368019 CSNK1A1P48729 337 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 RPS23P62266 143 aaKnown RBP9.91□□□□□ -0.82
USF1-201ENST00000368019 H3F3AP84243 136 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 BAXQ07812 192 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 ACSF3Q4G176 576 aaPredicted RBP9.91□□□□□ -0.82
USF1-201ENST00000368019 KRTCAP3Q53RY4 240 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 SOHLH1Q5JUK2 328 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 KRBOX4Q5JUW0 171 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 TMEM42Q69YG0 159 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 TMEM211Q6ICI0 200 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 C1QL2Q7Z5L3 287 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 WDSUB1Q8N9V3 476 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 SUMF2Q8NBJ7 301 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 RBMXL1Q96E39 390 aaKnown RBP9.91□□□□□ -0.82
USF1-201ENST00000368019 GNPNAT1Q96EK6 184 aaPredicted RBP9.91□□□□□ -0.82
USF1-201ENST00000368019 BOD1Q96IK1 185 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 HES7Q9BYE0 225 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 TOLLIPQ9H0E2 274 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 TREM2Q9NZC2 230 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 KLRF1Q9NZS2 232 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 C19orf25Q9UFG5 118 aaPredicted RBP9.91□□□□□ -0.82
USF1-201ENST00000368019 SH3BGRL2Q9UJC5 107 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 DNAJC13O75165 2243 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 ZNF407Q9C0G0 2248 aa9.91□□□□□ -0.82
USF1-201ENST00000368019 TRAV1-1A0A0B4J248 108 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 SEC14L6B5MCN3 397 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 RPL36A-HNRNPH2H7BZ11 118 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 C19orf84I3L1E1 186 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 M0R135 149 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 NEURL1O76050 574 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 OR2C1O95371 312 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 PRH1P02810 166 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 WNT2P09544 360 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 COX6B1P14854 86 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 CASP6P55212 293 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 RIPPLY3P57055 190 aa9.9□□□□□ -0.82
USF1-201ENST00000368019 MRPS34P82930 218 aaKnown RBP9.9□□□□□ -0.82
USF1-201ENST00000368019 EWSR1Q01844 656 aaKnown RBP eCLIP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms