RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 BATFQ16520 125 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 MS4A18Q3C1V0 323 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 UQCC1Q9NVA1 299 aa10.08□□□□□ -0.8
SYNE1-204ENST00000367248 A0A0U1RQV5 110 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 A0A1W2PNV4 684 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 CYB5R1Q9UHQ9 305 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 F5H697 171 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 PF4V1P10720 104 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 GGNBP1Q5YKI7 109 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 ZNF787Q6DD87 383 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 RELL2Q8NC24 303 aaPredicted RBP10.07□□□□□ -0.8
SYNE1-204ENST00000367248 ZNF439Q8NDP4 499 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 OR52L2PQ8NGH6 319 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 OR4S2Q8NH73 311 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 DYRK2Q92630 601 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 SEBOXQ9HB31 216 aaPredicted RBP10.07□□□□□ -0.8
SYNE1-204ENST00000367248 SIRT4Q9Y6E7 314 aaPredicted RBP10.07□□□□□ -0.8
SYNE1-204ENST00000367248 OOEPA6NGQ2 149 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 LANCL1O43813 399 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 SPNP16150 400 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 KIR2DS2P43631 304 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 TMEM267Q0VDI3 215 aaPredicted RBP10.07□□□□□ -0.8
SYNE1-204ENST00000367248 TUBG2Q9NRH3 451 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 ARID1AO14497 2285 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 MUC15Q8N387 334 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 LINC00052Q96N35 136 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 PARP11Q9NR21 331 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 BCL2L11O43521 198 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 FGF2P09038 288 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 SMIM17P0DL12 118 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 CTRB1P17538 263 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 RNFT1Q5M7Z0 435 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 CTRB2Q6GPI1 263 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 TIMP4Q99727 224 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 TMEM147Q9BVK8 224 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 SLC25A32Q9H2D1 315 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 THYN1Q9P016 225 aa10.07□□□□□ -0.8
SYNE1-204ENST00000367248 ZNF629Q9UEG4 869 aaPredicted RBP10.07□□□□□ -0.8
SYNE1-204ENST00000367248 BTN1A1Q13410 526 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 HAGHQ16775 308 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 C11orf87Q6NUJ2 197 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 OR1K1Q8NGR3 316 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 CACNA1IQ9P0X4 2223 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 GSTZ1O43708 216 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-204ENST00000367248 RAB5CP51148 216 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 RFLNBQ8N5W9 214 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 IGHV3OR16-12A0A075B7B8 117 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 H7BYZ3 331 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 RFPL3SP0C7P2 107 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 CDKN1AP38936 164 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 ZNF519Q8TB69 540 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 C1RLQ9NZP8 487 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 CHCHD2Q9Y6H1 151 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-204ENST00000367248 TGFBR3LH3BV60 316 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 RECKO95980 971 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 COL10A1Q03692 680 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 ZBTB44Q8NCP5 570 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 OR4F5Q8NH21 305 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 NEIL1Q96FI4 390 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-204ENST00000367248 GRAMD2BQ96HH9 432 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 OR4F4Q96R69 305 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 ARFGEF1Q9Y6D6 1849 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 CTDSPLO15194 276 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 ACSF3Q4G176 576 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-204ENST00000367248 H3F3CQ6NXT2 135 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 NTNG2Q96CW9 530 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 IMMP1LQ96LU5 166 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 WIPI2Q9Y4P8 454 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 A0A1W2PN81 502 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 CHRNA7P36544 502 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 ASCL5Q7RTU5 278 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 NUP37Q8NFH4 326 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 SFXN3Q9BWM7 321 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 AICDAQ9GZX7 198 aa10.06□□□□□ -0.8
SYNE1-204ENST00000367248 ZNF703Q9H7S9 590 aaPredicted RBP10.06□□□□□ -0.8
SYNE1-204ENST00000367248 MRPL22Q9NWU5 206 aaKnown RBP10.06□□□□□ -0.8
SYNE1-204ENST00000367248 DUS4LO95620 317 aaKnown RBP10.05□□□□□ -0.8
SYNE1-204ENST00000367248 SLC25A4P12235 298 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 KCNMB1Q16558 191 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 PIGYQ3MUY2 71 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 TEX30Q5JUR7 227 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 FNDC7Q5VTL7 733 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 KDF1Q8NAX2 398 aaPredicted RBP10.05□□□□□ -0.8
SYNE1-204ENST00000367248 RPS4Y2Q8TD47 263 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 PARP14Q460N5 1801 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 CKAP5Q14008 2032 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 CRHP06850 196 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 OR5AC1P0C628 307 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 LINC00271P0C7V0 271 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 TAGLN2P37802 199 aaKnown RBP10.05□□□□□ -0.8
SYNE1-204ENST00000367248 RAB32Q13637 225 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 CLEC12BQ2HXU8 276 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 VWA1Q6PCB0 445 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 P2RX4Q99571 388 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 DCTN5Q9BTE1 182 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 SRXN1Q9BYN0 137 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 C9orf170A2RU37 121 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 PF4P02776 101 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 PDLIM4P50479 330 aa10.05□□□□□ -0.8
SYNE1-204ENST00000367248 AAMDCQ9H7C9 122 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms