RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 CA2P00918 260 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 ARL14EPLP0DKL9 152 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 PRKACAP17612 351 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 GCLMP48507 274 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 C2orf80Q0P641 193 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 STX4Q12846 297 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 RESP18Q5W5W9 173 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 C10orf107Q8IVU9 208 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 GATD1Q8NB37 220 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 BIRC8Q96P09 236 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 ALX4Q9H161 411 aaPredicted RBP0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 RPRD1BQ9NQG5 326 aaKnown RBP0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 POMPQ9Y244 141 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 CR1P17927 2039 aa0.86□□□□□ -2.27
RNU4-48P-201ENST00000365559 ARAP3Q8WWN8 1544 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 A0A1W2PRG6 482 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 IGSF23A1L1A6 192 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 ARGFXA6NJG6 315 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 FNDC10F2Z333 226 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 RFXANKO14593 260 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 KDELR3O43731 214 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 PDCD6O75340 191 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 TPM2P07951 284 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 SLC2A1P11166 492 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 SFTPCP11686 197 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 CPMP14384 443 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 ZNF7P17097 686 aaPredicted RBP0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 RAB38P57729 211 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 OR8G1Q15617 311 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 ACTL10Q5JWF8 245 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 CLEC20AQ6ZU45 233 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 SSX7Q7RTT5 188 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 MUC15Q8N387 334 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 C2orf73Q8N5S3 287 aaPredicted RBP0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 OR6N2Q8NGY6 317 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 CASTOR1Q8WTX7 329 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 NELFBQ8WX92 580 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 CACNG8Q8WXS5 425 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 GAL3ST2Q9H3Q3 398 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 CRLF2Q9HC73 371 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 FAM206AQ9NX38 181 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 VAPAQ9P0L0 249 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 PSORS1C2Q9UIG4 136 aa0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 CHTOPQ9Y3Y2 248 aaKnown RBP0.85□□□□□ -2.27
RNU4-48P-201ENST00000365559 RP1L1Q8IWN7 2480 aaPredicted RBP0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 CRB1P82279 1406 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 IGHV3OR15-7A0A075B7D8 119 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 IGKV1-12A0A0C4DH73 117 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 A0A0J9YX75 114 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 IGKV1D-12P01611 117 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 GZMBP10144 247 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 ZNF3P17036 446 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 TTPAP49638 278 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 ATP5J2P56134 94 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 WDR43Q15061 677 aaKnown RBP eCLIP0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 FAM229BQ4G0N7 80 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 FAM19A3Q7Z5A8 133 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 TCAIMQ8N3R3 496 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 SLC25A45Q8N413 288 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 CD200R1Q8TD46 325 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 PDCD6IPQ8WUM4 868 aaKnown RBP0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 CAPZA3Q96KX2 299 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 APOL4Q9BPW4 351 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 SUCNR1Q9BXA5 334 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 SYT4Q9H2B2 425 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 NCOR1P1Q9H4R4 102 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 TBL2Q9Y4P3 447 aaKnown RBP0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 OR51B4Q9Y5P0 310 aa0.84□□□□□ -2.27
RNU4-48P-201ENST00000365559 FLG2Q5D862 2391 aaPredicted RBP0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 KIF27Q86VH2 1401 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 A8MWP6 167 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 TMEM250H0YL14 139 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 TRAPPC3O43617 180 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 SC5DO75845 299 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 CPN2P22792 545 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 RHOAP61586 193 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 HBG1P69891 147 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 HBG2P69892 147 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 TSPAN31Q12999 210 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 HTR4Q13639 388 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 HSP90AA4PQ58FG1 418 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 C6orf183Q5T699 404 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 FAHD1Q6P587 224 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 FAM58AQ8N1B3 248 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 SPICQ8N5J4 248 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 OR6K2Q8NGY2 324 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 SPPL2BQ8TCT7 592 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 DCANP1Q8TF63 244 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 CLDN23Q96B33 292 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 OR52B2Q96RD2 323 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 POTEKPQ9BYX7 375 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 TDRD3Q9H7E2 651 aaKnown RBP0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 HEY1Q9Y5J3 304 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 MINOS1-NBL1R4GNA1 71 aa0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 ZNF638Q14966 1978 aaKnown RBP0.83□□□□□ -2.28
RNU4-48P-201ENST00000365559 PTPRKQ15262 1439 aa0.82□□□□□ -2.28
RNU4-48P-201ENST00000365559 MUC21A0A0G2JKD1 596 aa0.82□□□□□ -2.28
RNU4-48P-201ENST00000365559 A0A0G2JQZ4 141 aa0.82□□□□□ -2.28
RNU4-48P-201ENST00000365559 MUC21A0A140T8X8 626 aa0.82□□□□□ -2.28
RNU4-48P-201ENST00000365559 PLPP3O14495 311 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms