RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 KIAA1324LA8MWY0 1029 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 FXYD1O00168 92 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 CSF2RBP32927 897 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 KRTCAP3Q53RY4 240 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 C16orf82Q7Z2V1 217 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 OR4P4Q8NGL7 312 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 SAP25Q8TEE9 199 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 ZNF385DQ9H6B1 395 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 RP1L1Q8IWN7 2480 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 IGKV3-20P01619 116 aa17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 ZNF658BQ4V348 819 aaPredicted RBP17.74■□□□□ 0.43
CDC42BPB-201ENST00000361246 PRDX2P32119 198 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 OR10G4Q8NGN3 311 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 OR10G9Q8NGN4 311 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 OR10G7Q8NGN6 311 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 Q8WTZ3 238 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 TMPRSS5Q9H3S3 457 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 WDR54Q9H977 334 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 ZNF629Q9UEG4 869 aaPredicted RBP17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 FAM181BA6NEQ2 426 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 OR4X1Q8NH49 305 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 MRGPRFQ96AM1 343 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 SF3B5Q9BWJ5 86 aaKnown RBP17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 SLC7A10Q9NS82 523 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 C1QCP02747 245 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 UCP2P55851 309 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 ZNF154Q13106 437 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 ZNF429Q86V71 674 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 PRSS3P2Q8NHM4 247 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 STARD4Q96DR4 205 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 FFAR1O14842 300 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 HLA-GP17693 338 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 GALR1P47211 349 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 STARD10Q9Y365 291 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 CENPVQ7Z7K6 275 aaPredicted RBP17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 NHLRC2Q8NBF2 726 aa17.73■□□□□ 0.43
CDC42BPB-201ENST00000361246 OR5AL1P0C617 328 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 SUMO1P63165 101 aaKnown RBP17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 PSG5Q15238 335 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 TCEAL7Q9BRU2 100 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 TRIM77I1YAP6 450 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 GSTZ1O43708 216 aaPredicted RBP17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 C11orf87Q6NUJ2 197 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 FAM122BQ7Z309 247 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 SH2D2AQ9NP31 389 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 NHLH1Q02575 133 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 NHLH2Q02577 135 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 PRB3Q04118 309 aaPredicted RBP17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 ABHD14BQ96IU4 210 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 WIPI2Q9Y4P8 454 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 PTBP1P26599 531 aaKnown RBP eCLIP17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 HCP5Q6MZN7 132 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 ZNF714Q96N38 554 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 TRAPPC2P0DI81 140 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 TRAPPC2BP0DI82 140 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 PLPPR5Q32ZL2 321 aa17.72■□□□□ 0.43
CDC42BPB-201ENST00000361246 DUSP18Q8NEJ0 188 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 NOL4LQ96MY1 436 aaPredicted RBP17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 NAT8BQ9UHF3 227 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 MARF1Q9Y4F3 1742 aaKnown RBP17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 ROM1Q03395 351 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 EXOGQ9Y2C4 368 aaKnown RBP17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 IGKV3OR2-268A0A0C4DH90 116 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 A0A1B0GUH1 482 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 ZPLD1Q8TCW7 415 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 COL4A1P02462 1669 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 CXorf51AA0A1B0GTR3 108 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 SFT2D2O95562 160 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 REG1AP05451 166 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 PRNTQ86SH4 94 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 BAP18Q8IXM2 172 aa17.71■□□□□ 0.43
CDC42BPB-201ENST00000361246 ADAP1O75689 374 aa17.71■□□□□ 0.42
CDC42BPB-201ENST00000361246 PSG2P11465 335 aa17.71■□□□□ 0.42
CDC42BPB-201ENST00000361246 KLRB1Q12918 225 aa17.71■□□□□ 0.42
CDC42BPB-201ENST00000361246 B4E171 279 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 PLPP2O43688 288 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 IGHV3-23P01764 117 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 TSPAN7P41732 249 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 RAB19A4D1S5 217 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 TIAF1O95411 115 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 ZNF552Q9H707 407 aaPredicted RBP17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 SRD5A3Q9H8P0 318 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 OR51B2Q9Y5P1 312 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 CTSSP25774 331 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 LIAT1Q6ZQX7 453 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 FAM214BQ7L5A3 538 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 MUC20Q8N307 709 aaPredicted RBP17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 A0A1W2PQD3 144 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 TMEM37Q8WXS4 190 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 AP5S1Q9NUS5 200 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 LOC389332A0A1B0GUA5 103 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 SFTA3P0C7M3 94 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 LCN2P80188 198 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 HMGCLL1Q8TB92 370 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 WDR34Q96EX3 536 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 SLC52A3Q9NQ40 469 aa17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 METTL1Q9UBP6 276 aaKnown RBP17.7■□□□□ 0.42
CDC42BPB-201ENST00000361246 C1QBP02746 253 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 LOXL4Q96JB6 756 aa17.69■□□□□ 0.42
CDC42BPB-201ENST00000361246 CXorf58Q96LI9 332 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms