RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 ZNF580Q9UK33 172 aa10.81□□□□□ -0.68
VPS29-201ENST00000360579 IGHV1-3A0A0C4DH29 117 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 A0A1W2PQL4 384 aaPredicted RBP10.8□□□□□ -0.68
VPS29-201ENST00000360579 AQP12BA6NM10 295 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 NPIPB11E5RHQ5 1161 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 IGHV3-7P01780 117 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 PSMB8P28062 276 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 GNG10P50151 68 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 CFHR3Q02985 330 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 ZFAND6Q6FIF0 208 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 OVCH2Q7RTZ1 564 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 FAM220AQ7Z4H9 259 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 AQP12AQ8IXF9 295 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 PRSS35Q8N3Z0 413 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 Q8N6K4 173 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 TCEANCQ8N8B7 351 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 Q8N9W7 124 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 OR13A1Q8NGR1 328 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 CANT1Q8WVQ1 401 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 RFT1Q96AA3 541 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 ISOC1Q96CN7 298 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 NRBF2Q96F24 287 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 TBX5Q99593 518 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 CHCHD6Q9BRQ6 235 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 ZFAND3Q9H8U3 227 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 WARS2Q9UGM6 360 aaKnown RBP10.8□□□□□ -0.68
VPS29-201ENST00000360579 KIF25Q9UIL4 384 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 ARL2BPQ9Y2Y0 163 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 HYDINQ4G0P3 5121 aa10.8□□□□□ -0.68
VPS29-201ENST00000360579 MT-ND2P03891 347 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 IGF1P05019 195 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 DBTP11182 482 aaKnown RBP10.79□□□□□ -0.68
VPS29-201ENST00000360579 KCNJ3P48549 501 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 EFNB1P98172 346 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 RUNX1Q01196 453 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 PAX5Q02548 391 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 ZNF616Q08AN1 781 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 LTC4SQ16873 150 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 PAN3Q58A45 887 aaKnown RBP10.79□□□□□ -0.68
VPS29-201ENST00000360579 RDH10Q8IZV5 341 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 OR5D18Q8NGL1 313 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 OR1N2Q8NGR9 330 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 FGGYQ96C11 551 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 CCDC124Q96CT7 223 aaKnown RBP10.79□□□□□ -0.68
VPS29-201ENST00000360579 UBE2E2Q96LR5 201 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 S1PR3Q99500 378 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 ISYNA1Q9NPH2 558 aa10.79□□□□□ -0.68
VPS29-201ENST00000360579 SORL1Q92673 2214 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 H0YJX3 145 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 HSPB6O14558 160 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 APOL3O95236 402 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 MOSP00540 346 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 ISG15P05161 165 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 HCKP08631 526 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 IL3RAP26951 378 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 CD1BP29016 333 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 HTR1FP30939 366 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 SOX6P35712 828 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 MTNR1BP49286 362 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 CDK5R1Q15078 307 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 FAHD1Q6P587 224 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 TMEM65Q6PI78 240 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 OR10H4Q8NGA5 316 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 RFESDQ8TAC1 157 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 MYOZ3Q8TDC0 251 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 KCTD7Q96MP8 289 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 MBOAT4Q96T53 435 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 ZNF446Q9NWS9 450 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 VSIG4Q9Y279 399 aa10.78□□□□□ -0.68
VPS29-201ENST00000360579 IGHV3-72A0A0B4J1Y9 119 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 I3L521 148 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 M0R129 80 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 OVOL1O14753 267 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 SAP30O75446 220 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 GP9P14770 177 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 ATP6V1E1P36543 226 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 KIR3DL2P43630 455 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 REG1BP48304 166 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 ISL1P61371 349 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 OR6Q1Q8NGQ2 317 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 OR13C9Q8NGT0 318 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 MRGPRDQ8TDS7 321 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 NSL1Q96IY1 281 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 IL4I1Q96RQ9 567 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 TM2D3Q9BRN9 247 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 PLSCR3Q9NRY6 295 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 FAM118AQ9NWS6 357 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 GNG8Q9UK08 70 aa10.77□□□□□ -0.69
VPS29-201ENST00000360579 A0A1W2PPE3 182 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 LDLRAD4O15165 306 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 TXNL1O43396 289 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 TMEM225BP0DP42 221 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 SPNP16150 400 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 GZMHP20718 246 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 SSTR5P35346 364 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 DAPP51397 102 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 ZP1P60852 638 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 RSBN1Q5VWQ0 802 aaPredicted RBP10.76□□□□□ -0.69
VPS29-201ENST00000360579 C12orf73Q69YU5 71 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 ELP2Q6IA86 826 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms