RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TFF1P04155 84 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 GAPDHP04406 335 aaKnown RBP4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 VDAC1P21796 283 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 FUT6P51993 359 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 MADCAM1Q13477 382 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 AKIRIN2Q53H80 203 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 FDX2Q6P4F2 183 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 OR51T1Q8NGJ9 327 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 COQ2Q96H96 371 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 PPP1R36Q96LQ0 422 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 OR5M11Q96RB7 305 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 INTS14Q96SY0 518 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 C8orf4Q9NR00 106 aa4.51□□□□□ -1.69
CDC42SE2-201ENST00000360515 J3KTA2 159 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 ITGB1BP1O14713 200 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 GYG2O15488 501 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 PSPNO60542 156 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 SULT1C4O75897 302 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 APOL3O95236 402 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 NRASP01111 189 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 CD74P04233 296 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 BTF3P20290 206 aaKnown RBP4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 RGS21Q2M5E4 152 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 AGKQ53H12 422 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 IGSF11Q5DX21 431 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 ZNF782Q6ZMW2 699 aaPredicted RBP4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 RPP25LQ8N5L8 163 aaKnown RBP4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 ANKRD42Q8N9B4 389 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 SCPEP1Q9HB40 452 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 TECRQ9NZ01 308 aaKnown RBP4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 TRBV4-1A0A0J9YWV2 114 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 C15orf65H3BRN8 121 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 ORC5O43913 435 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 TNFRSF1BP20333 461 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 OR1E2P47887 323 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 IL13RA2Q14627 380 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 FAM57BQ71RH2 274 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 LINC00596Q86U02 117 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 ZNF329Q86UD4 541 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 TMEM217Q8N7C4 229 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 RP9Q8TA86 221 aaKnown RBP4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 NDNFQ8TB73 568 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 RTN4IP1Q8WWV3 396 aaPredicted RBP4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 TOMM40LQ969M1 308 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 HSPB9Q9BQS6 159 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 KRTAP3-3Q9BYR6 98 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 KRTAP3-2Q9BYR7 98 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 CHST5Q9GZS9 411 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 CCDC167Q9P0B6 97 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 RCC2Q9P258 522 aaKnown RBP4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 APLNQ9ULZ1 77 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 IGKV1-27A0A075B6S5 117 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 ODAMA1E959 279 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 PSMD9O00233 223 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 AQP4P55087 323 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 EFNB1P98172 346 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 IRF3Q14653 427 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 SLC25A48Q6ZT89 311 aaKnown RBP4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 PGAM5Q96HS1 289 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 SPACA5Q96QH8 159 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 AMELYQ99218 206 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 ST6GALNAC5Q9BVH7 336 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 SRA1Q9HD15 236 aaKnown RBP4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 IL36GQ9NZH8 169 aa4.5□□□□□ -1.69
CDC42SE2-201ENST00000360515 IGHV7-81A0A0B4J1V7 117 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 TRAV25A0A0B4J276 109 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 ZNF785A8K8V0 405 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 ANGPT2O15123 496 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 TTRP02766 147 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 ZP3P21754 424 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 CBX5P45973 191 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 HAAOP46952 286 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 POU3F4P49335 361 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 ALDH3A2P51648 485 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 GNG2P59768 71 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 PITPNAQ00169 270 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 ZNF45Q02386 682 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 LRRC36Q1X8D7 754 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 Q6ZR54 194 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 OR8D4Q8NGM9 314 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 HOPXQ9BPY8 73 aaPredicted RBP4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 FN3KQ9H479 309 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 SLC33A1O00400 549 aaPredicted RBP4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 NXPH2O95156 264 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 ISG15P05161 165 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 HSD11B1P28845 292 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 MAPRE2Q15555 327 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 ZNF343Q6P1L6 599 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 ZNF529Q6P280 563 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 ZNF600Q6ZNG1 722 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 GPR141Q7Z602 305 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 OR2T12Q8NG77 320 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 OR4D6Q8NGJ1 314 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 OR4K13Q8NH42 304 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 PP6455Q8WZ26 134 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 HSH2DQ96JZ2 352 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 TAS2R1Q9NYW7 299 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 DMRT1Q9Y5R6 373 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 WSB1Q9Y6I7 421 aa4.49□□□□□ -1.69
CDC42SE2-201ENST00000360515 IGHV4OR15-8A0A075B7B6 117 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms