RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TSPAN5P62079 268 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 COL10A1Q03692 680 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 GRK1Q15835 563 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 AGAP6Q5VW22 663 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 PPP1R35Q8TAP8 253 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 MRPL30Q8TCC3 161 aaKnown RBP11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 TMEM165Q9HC07 324 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 CBLN4Q9NTU7 201 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 NECAP2Q9NVZ3 263 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 MGAT4AQ9UM21 535 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 ALG5Q9Y673 324 aa11.61□□□□□ -0.55
PDLIM5-203ENST00000359265 IGHV3OR15-7A0A075B7D8 119 aa11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 A0A0B4J293 547 aa11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 TMEM30CPA0ZSE6 113 aa11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 CYB5R3P00387 301 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 CD99P14209 185 aa11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 PRDX2P32119 198 aa11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 GLP1RP43220 463 aa11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 ATXN7L3Q14CW9 347 aaPredicted RBP11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 ZCCHC24Q8N2G6 241 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 ZDHHC22Q8N966 263 aa11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 ASCC1Q8N9N2 400 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 OR13C8Q8NGS7 320 aa11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 PLPPR1Q8TBJ4 325 aa11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 GIMAP1Q8WWP7 306 aa11.6□□□□□ -0.55
PDLIM5-203ENST00000359265 IGKV1D-17A0A075B6S4 117 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 TMEM82A0PJX8 343 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 OOEPA6NGQ2 149 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 LGALS8O00214 317 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 SDCBPO00560 298 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 PSPNO60542 156 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 RLN1P04808 185 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 MUC1P15941 1255 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 GABRA2P47869 451 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 MECP2P51608 486 aaKnown RBP11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 HLA-DRB3P79483 266 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 HOXA4Q00056 320 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 TLE4Q04727 773 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 TEX36Q5VZQ5 186 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 ZNF880Q6PDB4 577 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 ZNF497Q6ZNH5 498 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 Q6ZPA2 131 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 OVCH2Q7RTZ1 564 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 GAPTQ8N292 157 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 CD177Q8N6Q3 437 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 OR5T2Q8NGG2 359 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 CHAC2Q8WUX2 184 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 CCDC107Q8WV48 283 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 DACT3Q96B18 629 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 SNX22Q96L94 193 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 SCGB3A2Q96PL1 93 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 VRK1Q99986 396 aaPredicted RBP11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 FLVCR2Q9UPI3 526 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 DSCAML1Q8TD84 2053 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 ACANP16112 2415 aa11.59□□□□□ -0.55
PDLIM5-203ENST00000359265 ABCA4P78363 2273 aa11.58□□□□□ -0.55
PDLIM5-203ENST00000359265 ROS1P08922 2347 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 TRAV38-1A0A0B4J264 116 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 IGHV1-69-2A0A0G2JMI3 117 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 C7orf66A4D0T2 115 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 NKX6-3A6NJ46 265 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 TRDCB7Z8K6 153 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 FABP7O15540 132 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 IL5P05113 134 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 GSTT2P0CG29 244 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 OR5H8P0DN80 308 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 ECI1P42126 302 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 OR3A1P47881 315 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 METTL11BQ5VVY1 283 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 STUMQ69YW2 141 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 SLC35E4Q6ICL7 350 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 C11orf71Q6IPW1 123 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 DTX2Q86UW9 622 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 LHFPL1Q86WI0 220 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 OR6F1Q8NGZ6 308 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 TERB2Q8NHR7 220 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 ANGPTL6Q8NI99 470 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 RAB1BQ9H0U4 201 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 UBTD1Q9HAC8 227 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 GPN1Q9HCN4 374 aaPredicted RBP11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 TMEM106BQ9NUM4 274 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 ING3Q9NXR8 418 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 ZNF222Q9UK12 451 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 TRAPPC2LQ9UL33 140 aa11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 PRRC2AP48634 2157 aaKnown RBP11.58□□□□□ -0.56
PDLIM5-203ENST00000359265 TMEM178BH3BS89 294 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 ZNF737O75373 536 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 CTXN2P0C2S0 81 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 TRAPPC2P0DI81 140 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 TRAPPC2BP0DI82 140 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 ANXA7P20073 488 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 FPR2P25090 351 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 PAX5Q02548 391 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 CARTPTQ16568 116 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 FAM201AQ5SY85 155 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 C17orf107Q6ZR85 190 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 ZNF561Q8N587 486 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 OR4A4PQ8NGN8 299 aa11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 ZNF2Q9BSG1 426 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-203ENST00000359265 TRAF4Q9BUZ4 470 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms