RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 BEX1Q9HBH7 125 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 RANGRFQ9HD47 186 aaPredicted RBP11.36□□□□□ -0.59
CCDC197-201ENST00000359253 SHPKQ9UHJ6 478 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 OPN4Q9UHM6 478 aa11.36□□□□□ -0.59
CCDC197-201ENST00000359253 SPTAN1Q13813 2472 aaKnown RBP11.36□□□□□ -0.59
CCDC197-201ENST00000359253 TMEM30CPA0ZSE6 113 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 A1L4Q6 167 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 NPIPB11E5RHQ5 1161 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 E7EQL1 145 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 SIRPB1O00241 398 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 DUS4LO95620 317 aaKnown RBP11.35□□□□□ -0.59
CCDC197-201ENST00000359253 MUC1P15941 1255 aaPredicted RBP11.35□□□□□ -0.59
CCDC197-201ENST00000359253 HLA-GP17693 338 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 ERP29P30040 261 aaKnown RBP11.35□□□□□ -0.59
CCDC197-201ENST00000359253 PRDX2P32119 198 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 IL13RA1P78552 427 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 HLA-DRB3P79483 266 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 DHRS2Q13268 280 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 KCNJ8Q15842 424 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 ADAM5Q6NVV9 412 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 MOGAT3Q86VF5 341 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 SLC38A6Q8IZM9 456 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 C1orf87Q8N0U7 546 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 MUC20Q8N307 709 aaPredicted RBP11.35□□□□□ -0.59
CCDC197-201ENST00000359253 GCSAMQ8N6F7 178 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 OR2AK2Q8NG84 335 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 OR11H7Q8NGC8 314 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 LINC01560Q8TB33 94 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 PIK3IP1Q96FE7 263 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 SNX22Q96L94 193 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 TMEM204Q9BSN7 226 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 ZNF436Q9C0F3 470 aaPredicted RBP11.35□□□□□ -0.59
CCDC197-201ENST00000359253 GCM1Q9NP62 436 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 MBNL3Q9NUK0 354 aaKnown RBP11.35□□□□□ -0.59
CCDC197-201ENST00000359253 KCNIP1Q9NZI2 227 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 DNAJB11Q9UBS4 358 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 OR14J1Q9UGF5 321 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 ZNF222Q9UK12 451 aa11.35□□□□□ -0.59
CCDC197-201ENST00000359253 C9orf170A2RU37 121 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 FAM221AA4D161 298 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 OR5H14A6NHG9 310 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 RFPL4AA6NLU0 287 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 RFPL4AL1F8VTS6 287 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 RGS11O94810 467 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 OR2A4O95047 310 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 GOSR1O95249 250 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 HLA-AP01891 365 aaKnown RBP11.34□□□□□ -0.59
CCDC197-201ENST00000359253 GIPP09681 153 aaPredicted RBP11.34□□□□□ -0.59
CCDC197-201ENST00000359253 PGAM2P15259 253 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 GRNP28799 593 aaKnown RBP11.34□□□□□ -0.59
CCDC197-201ENST00000359253 FCGR2CP31995 323 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 NPY4RP50391 375 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 RAP2BP61225 183 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 HERV-K104P61576 105 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 CD300CQ08708 224 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 C6orf183Q5T699 404 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 LIN54Q6MZP7 749 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 NOXA1Q86UR1 476 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 FAM185AQ8N0U4 392 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 OR5D13Q8NGL4 314 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 MITD1Q8WV92 249 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 DYRK2Q92630 601 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 MOB3AQ96BX8 217 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 HYLS1Q96M11 299 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 OR2A7Q96R45 310 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 CABLES2Q9BTV7 478 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 C5orf66Q9H5L9 145 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 RAB9BQ9NP90 201 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 MGAT4CQ9UBM8 478 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 TRAPPC2LQ9UL33 140 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 PPP1R3CQ9UQK1 317 aa11.34□□□□□ -0.59
CCDC197-201ENST00000359253 PIGBOS1A0A0B4J2F0 54 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 OOEPA6NGQ2 149 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 C19orf84I3L1E1 186 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 WNT9BO14905 357 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 SFT2D2O95562 160 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 ZNF728P0DKX0 622 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 PSG2P11465 335 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 COX6B1P14854 86 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 CD34P28906 385 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 GZMKP49863 264 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 ZNF672Q499Z4 452 aaPredicted RBP11.33□□□□□ -0.6
CCDC197-201ENST00000359253 TEX36Q5VZQ5 186 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 ZNF561Q8N587 486 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 CCDC71LQ8N9Z2 235 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 COQ8AQ8NI60 647 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 FAM216AQ8WUB2 273 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 CAPSLQ8WWF8 208 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 LURAP1Q96LR2 239 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 FYTTD1Q96QD9 318 aaKnown RBP11.33□□□□□ -0.6
CCDC197-201ENST00000359253 VRK1Q99986 396 aaPredicted RBP11.33□□□□□ -0.6
CCDC197-201ENST00000359253 RTBDNQ9BSG5 229 aaPredicted RBP11.33□□□□□ -0.6
CCDC197-201ENST00000359253 FAM234AQ9H0X4 552 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 DNTTIP1Q9H147 329 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 CISD1Q9NZ45 108 aaKnown RBP11.33□□□□□ -0.6
CCDC197-201ENST00000359253 KCNIP3Q9Y2W7 256 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 HCFC1P51610 2035 aa11.33□□□□□ -0.6
CCDC197-201ENST00000359253 TRBV6-7A0A0A0MS04 114 aa11.32□□□□□ -0.6
CCDC197-201ENST00000359253 IGHV3-64DA0A0J9YX35 117 aa11.32□□□□□ -0.6
CCDC197-201ENST00000359253 FAM172BPA6NC97 362 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms